Renmin Han

According to our database, Renmin Han authored at least 30 papers between 2010 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

Highly efficient clustering of long-read transcriptomic data with GeLuster.

Junchi Ma, Xiaoyu Zhao, Enfeng Qi, Renmin Han, Ting Yu, Guojun Li

Bioinform., February, 2024

Improved Denoising of Cryo-Electron Microscopy Micrographs with Simulation-Aware Pretraining.

Zhidong Yang, Hongjia Li, Dawei Zang, Renmin Han, Fa Zhang

J. Comput. Biol., 2024

FP-Zernike: An Open-source Structural Database Construction Toolkit for Fast Structure Retrieval.

Junhai Qi, Chenjie Feng, Yulin Shi, Jianyi Yang, Fa Zhang, Guojun Li, Renmin Han

Genom. Proteom. Bioinform., 2024

GFPack++: Improving 2D Irregular Packing by Learning Gradient Field with Attention.

Tianyang Xue, Lin Lu, Yang Liu, Mingdong Wu, Hao Dong, Yanbin Zhang, Renmin Han, Baoquan Chen

CoRR, 2024

Serial Section Microscopy Image Inpainting Guided by Axial Optical Flow.

Yiran Cheng, Bintao He, Fa Zhang, Renmin Han

Proceedings of the 32nd ACM International Conference on Multimedia, MM 2024, Melbourne, VIC, Australia, 28 October 2024, 2024

2023

A physics-informed convolutional neural network for the simulation and prediction of two-phase Darcy flows in heterogeneous porous media.

Zhao Zhang, Xia Yan, Piyang Liu, Kai Zhang, Renmin Han, Sheng Wang

J. Comput. Phys., March, 2023

CryoAlign: feature-based method for global and local 3D alignment of EM density maps.

Bintao He, Fa Zhang, Chenjie Feng, Jianyi Yang, Xin Gao, Renmin Han

CoRR, 2023

SaID: Simulation-Aware Image Denoising Pre-trained Model for Cryo-EM Micrographs.

Zhidong Yang, Hongjia Li, Dawei Zang, Renmin Han, Fa Zhang

Proceedings of the Bioinformatics Research and Applications - 19th International Symposium, 2023

2022

Correction of image distortion in large-field ssEM stitching by an unsupervised intermediate-space solving network.

Bintao He, Yan Zhang, Fa Zhang, Renmin Han

Bioinform., October, 2022

Macromolecules Structural Classification With a 3D Dilated Dense Network in Cryo-Electron Tomography.

Shan Gao, Renmin Han, Xiangrui Zeng, Zhiyong Liu, Min Xu, Fa Zhang

IEEE ACM Trans. Comput. Biol. Bioinform., 2022

Neighborhood-aware Geometric Encoding Network for Point Cloud Registration.

Lifa Zhu, Haining Guan, Changwei Lin, Renmin Han

CoRR, 2022

Noise-Transfer2Clean: denoising cryo-EM images based on noise modeling and transfer.

Hongjia Li, Hui Zhang, Xiaohua Wan, Zhidong Yang, Chengmin Li, Jintao Li, Renmin Han, Ping Zhu, Fa Zhang

Bioinform., 2022

2021

A novel constrained reconstruction model towards high-resolution subtomogram averaging.

Renmin Han, Lun Li, Peng Yang, Fa Zhang, Xin Gao

Bioinform., 2021

Robust and ultrafast fiducial marker correspondence in electron tomography by a two-stage algorithm considering local constraints.

Renmin Han, Guojun Li, Xin Gao

Bioinform., 2021

TransRef enables accurate transcriptome assembly by redefining accurate neo-splicing graphs.

Ting Yu, Renmin Han, Zhaoyuan Fang, Zengchao Mu, Hongyu Zheng, Juntao Liu

Briefings Bioinform., 2021

Self-Supervised Cryo-Electron Tomography Volumetric Image Restoration from Single Noisy Volume with Sparsity Constraint.

Zhidong Yang, Fa Zhang, Renmin Han

Proceedings of the 2021 IEEE/CVF International Conference on Computer Vision, 2021

A Hybrid Frequency-Spatial Domain Model for Sparse Image Reconstruction in Scanning Transmission Electron Microscopy.

Bintao He, Fa Zhang, Huanshui Zhang, Renmin Han

Proceedings of the 2021 IEEE/CVF International Conference on Computer Vision, 2021

2020

Compressed sensing improved iterative reconstruction-reprojection algorithm for electron tomography.

Lun Li, Renmin Han, Zhaotian Zhang, Tiande Guo, Zhiyong Liu, Fa Zhang

BMC Bioinform., 2020

Novel algorithms for efficient subsequence searching and mapping in nanopore raw signals towards targeted sequencing.

Renmin Han, Sheng Wang, Xin Gao

Bioinform., 2020

Dilated-DenseNet for Macromolecule Classification in Cryo-electron Tomography.

Shan Gao, Renmin Han, Xiangrui Zeng, Xuefeng Cui, Zhiyong Liu, Min Xu, Fa Zhang

Proceedings of the Bioinformatics Research and Applications - 16th International Symposium, 2020

2019

PIXER: an automated particle-selection method based on segmentation using a deep neural network.

Jingrong Zhang, Zihao Wang, Yu Chen, Renmin Han, Zhiyong Liu, Fei Sun, Fa Zhang

BMC Bioinform., 2019

AuTom-dualx: a toolkit for fully automatic fiducial marker-based alignment of dual-axis tilt series with simultaneous reconstruction.

Renmin Han, Xiaohua Wan, Lun Li, Albert F. Lawrence, Peng Yang, Yu Li, Sheng Wang, Fei Sun, Zhiyong Liu, Xin Gao, Fa Zhang

Bioinform., 2019

A joint method for marker-free alignment of tilt series in electron tomography.

Renmin Han, Zhipeng Bao, Xiangrui Zeng, Tongxin Niu, Fa Zhang, Min Xu, Xin Gao

Bioinform., 2019

2018

DLBI: deep learning guided Bayesian inference for structure reconstruction of super-resolution fluorescence microscopy.

Yu Li, Fan Xu, Fa Zhang, Pingyong Xu, Mingshu Zhang, Ming Fan, Lihua Li, Xin Gao, Renmin Han

Bioinform., 2018

DeepSimulator: a deep simulator for Nanopore sequencing.

Yu Li, Renmin Han, Chongwei Bi, Mo Li, Sheng Wang, Xin Gao

Bioinform., 2018

A fast fiducial marker tracking model for fully automatic alignment in electron tomography.

Renmin Han, Fa Zhang, Xin Gao

Bioinform., 2018

An accurate and rapid continuous wavelet dynamic time warping algorithm for end-to-end mapping in ultra-long nanopore sequencing.

Renmin Han, Yu Li, Xin Gao, Sheng Wang

Bioinform., 2018

Fiducial marker detection via deep learning approach for electron tomography.

Yu Hao, Renmin Han, Xiaohua Wan, Fa Zhang, Shiwei Sun

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

2013

Iterative Methods in Large Field Electron Microscope Tomography.

Xiaohua Wan, Sebastien Phan, Albert F. Lawrence, Fa Zhang, Renmin Han, Zhiyong Liu, Mark H. Ellisman

SIAM J. Sci. Comput., 2013

2010

QoS Routing in General Petersen-Torus Networks: A Case Study.

Renmin Han, Jun Huang

J. Convergence Inf. Technol., 2010