Rasmus Agren

According to our database, Rasmus Agren authored at least 8 papers between 2010 and 2018.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2018

RAVEN 2.0: A versatile toolbox for metabolic network reconstruction and a case study on Streptomyces coelicolor.

Hao Wang, Simonas Marcisauskas, Benjamín J. Sánchez, Iván Domenzain, Daniel Hermansson, Rasmus Agren, Jens Nielsen, Eduard J. Kerkhoven

PLoS Comput. Biol., 2018

2015

Metabolic Needs and Capabilities of <i>Toxoplasma gondii </i> through Combined Computational and Experimental Analysis.

Stepan Tymoshenko, Rebecca D. Oppenheim, Rasmus Agren, Jens Nielsen, Dominique Soldati-Favre, Vassily Hatzimanikatis

PLoS Comput. Biol., 2015

2013

The RAVEN Toolbox and Its Use for Generating a Genome-scale Metabolic Model for <i>Penicillium chrysogenum</i>.

Rasmus Agren, Liming Liu, Saeed Shoaie, Wanwipa Vongsangnak, Intawat Nookaew, Jens Nielsen

PLoS Comput. Biol., 2013

2012

Reconstruction of Genome-Scale Active Metabolic Networks for 69 Human Cell Types and 16 Cancer Types Using INIT.

Rasmus Agren, Sergio Bordel, Adil Mardinoglu, Natapol Pornputtapong, Intawat Nookaew, Jens Nielsen

PLoS Comput. Biol., 2012

Genome-scale metabolic reconstructions of Pichia stipitis and Pichia pastoris and in silico evaluation of their potentials.

Luis Caspeta, Saeed Shoaie, Rasmus Agren, Intawat Nookaew, Jens Nielsen

BMC Syst. Biol., 2012

2011

MEMOSys: Bioinformatics platform for genome-scale metabolic models.

Stephan Pabinger, Robert Rader, Rasmus Agren, Jens Nielsen, Zlatko Trajanoski

BMC Syst. Biol., 2011

2010

Sampling the Solution Space in Genome-Scale Metabolic Networks Reveals Transcriptional Regulation in Key Enzymes.

Sergio Bordel, Rasmus Agren, Jens Nielsen

PLoS Comput. Biol., 2010

BioMet Toolbox: genome-wide analysis of metabolism.

Marija Cvijovic, Roberto Olivares-Hernández, Rasmus Agren, Niklas Dahr, Wanwipa Vongsangnak, Intawat Nookaew, Kiran Raosaheb Patil, Jens Nielsen

Nucleic Acids Res., 2010