Raluca Gordân

According to our database, Raluca Gordân authored at least 15 papers between 2006 and 2022.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2022

Transcription Factor-Centric Approach to Identify Non-recurring Putative Regulatory Drivers in Cancer.

Jingkang Zhao, Vincentius Martin, Raluca Gordân

Proceedings of the Research in Computational Molecular Biology, 2022

2019

QBiC-Pred: quantitative predictions of transcription factor binding changes due to sequence variants.

Vincentius Martin, Jingkang Zhao, Ariel Afek, Zachery Mielko, Raluca Gordân

Nucleic Acids Res., 2019

2017

Quantifying the Impact of Non-coding Variants on Transcription Factor-DNA Binding.

Jingkang Zhao, Dongshunyi Li, Jungkyun Seo, Andrew S. Allen, Raluca Gordân

Proceedings of the Research in Computational Molecular Biology, 2017

2015

Nonconsensus Protein Binding to Repetitive DNA Sequence Elements Significantly Affects Eukaryotic Genomes.

Ariel Afek, Hila Cohen, Shiran Barber-Zucker, Raluca Gordân, David B. Lukatsky

PLoS Comput. Biol., 2015

2014

NAR Breakthrough Article: TFBSshape: a motif database for DNA shape features of transcription factor binding sites.

Lin Yang, Tianyin Zhou, Iris Dror, Anthony Mathelier, Wyeth W. Wasserman, Raluca Gordân, Remo Rohs

Nucleic Acids Res., 2014

COUGER - co-factors associated with uniquely-bound genomic regions.

Alina Munteanu, Uwe Ohler, Raluca Gordân

Nucleic Acids Res., 2014

2013

Stability selection for regression-based models of transcription factor-DNA binding specificity.

Fantine Mordelet, John Horton, Alexander J. Hartemink, Barbara E. Engelhardt, Raluca Gordân

Bioinform., 2013

Distinguishing between Genomic Regions Bound by Paralogous Transcription Factors.

Alina Munteanu, Raluca Gordân

Proceedings of the Research in Computational Molecular Biology, 2013

2012

Identification of Cell Cycle-Regulated, Putative Hyphal Genes in Candida Albicans.

Raluca Gordân, Saumyadipta Pyne, Martha L. Bulyk

Proceedings of the Biocomputing 2012: Proceedings of the Pacific Symposium, 2012

2010

Distinguishing Direct versus Indirect Transcription Factor-DNA Interactions.

Raluca Gordân, Alexander J. Hartemink, Martha L. Bulyk

Proceedings of the Research in Computational Molecular Biology, 2010

2008

A Fast, Alignment-Free, Conservation-Based Method for Transcription Factor Binding Site Discovery.

Raluca Gordân, Leelavati Narlikar, Alexander J. Hartemink

Proceedings of the Research in Computational Molecular Biology, 2008

Using DNA Duplex Stability Information for Transcription Factor Binding Site Discovery.

Raluca Gordân, Alexander J. Hartemink

Proceedings of the Biocomputing 2008, 2008

2007

A Nucleosome-Guided Map of Transcription Factor Binding Sites in Yeast.

Leelavati Narlikar, Raluca Gordân, Alexander J. Hartemink

PLoS Comput. Biol., 2007

Nucleosome Occupancy Information Improves <i>de novo</i> Motif Discovery.

Leelavati Narlikar, Raluca Gordân, Alexander J. Hartemink

Proceedings of the Research in Computational Molecular Biology, 2007

2006

Informative priors based on transcription factor structural class improve <i>de novo</i> motif discovery.

Leelavati Narlikar, Raluca Gordân, Uwe Ohler, Alexander J. Hartemink

Proceedings of the Proceedings 14th International Conference on Intelligent Systems for Molecular Biology 2006, 2006