Raja Jothi

According to our database, Raja Jothi authored at least 20 papers between 2003 and 2016.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2016

Positive-unlabeled ensemble learning for kinase substrate prediction from dynamic phosphoproteomics data.

Pengyi Yang, Sean J. Humphrey, David E. James, Yee Hwa Yang, Raja Jothi

Bioinform., 2016

2015

Knowledge-Based Analysis for Detecting Key Signaling Events from Time-Series Phosphoproteomics Data.

Pengyi Yang, Xiaofeng Zheng, Vivek Jayaswal, Guang Hu, Jean Yee Hwa Yang, Raja Jothi

PLoS Comput. Biol., 2015

2011

DOMINE: a comprehensive collection of known and predicted domain-domain interactions.

Sailu Yellaboina, Asba Tasneem, Dmitri V. Zaykin, Balaji Raghavachari, Raja Jothi

Nucleic Acids Res., 2011

2009

Improved approximation algorithms for the single-sink buy-at-bulk network design problems.

Raja Jothi, Balaji Raghavachari

J. Discrete Algorithms, 2009

Degree-bounded minimum spanning trees.

Raja Jothi, Balaji Raghavachari

Discret. Appl. Math., 2009

Knowledge-guided inference of domain-domain interactions from incomplete protein-protein interaction networks.

Mei Liu, Xue-wen Chen, Raja Jothi

Bioinform., 2009

2008

DOMINE: a database of protein domain interactions.

Balaji Raghavachari, Asba Tasneem, Teresa M. Przytycka, Raja Jothi

Nucleic Acids Res., 2008

2007

Approximating the k-traveling repairman problem with repairtimes.

Raja Jothi, Balaji Raghavachari

J. Discrete Algorithms, 2007

Discovering functional linkages and uncharacterized cellular pathways using phylogenetic profile comparisons: a comprehensive assessment.

Raja Jothi, Teresa M. Przytycka, L. Aravind

BMC Bioinform., 2007

2006

Load-balanced agent activation for value-added network services.

Chao Gong, Kamil Saraç, Ovidiu Daescu, Balaji Raghavachari, Raja Jothi

Comput. Commun., 2006

COCO-CL: hierarchical clustering of homology relations based on evolutionary correlations.

Raja Jothi, Elena Zotenko, Asba Tasneem, Teresa M. Przytycka

Bioinform., 2006

Decomposition of overlapping protein complexes: A graph theoretical method for analyzing static and dynamic protein associations.

Elena Zotenko, Katia S. Guimarães, Raja Jothi, Teresa M. Przytycka

Algorithms Mol. Biol., 2006

2005

Approximation algorithms for the capacitated minimum spanning tree problem and its variants in network design.

Raja Jothi, Balaji Raghavachari

ACM Trans. Algorithms, 2005

Predicting protein-protein interaction by searching evolutionary tree automorphism space.

Raja Jothi, Maricel G. Kann, Teresa M. Przytycka

Proceedings of the Proceedings Thirteenth International Conference on Intelligent Systems for Molecular Biology 2005, 2005

2004

Survivable network design: the capacitated minimum spanning network problem.

Raja Jothi, Balaji Raghavachari

Inf. Process. Lett., 2004

Optimal placement of NAK-suppressing agents for reliable multicast: a partial deployment case.

Ovidiu Daescu, Raja Jothi, Balaji Raghavachari, Kamil Saraç

Proceedings of the 2004 ACM Symposium on Applied Computing (SAC), 2004

Minimum Latency Tours and the k-Traveling Repairmen Problem.

Raja Jothi, Balaji Raghavachari

Proceedings of the LATIN 2004: Theoretical Informatics, 2004

Dynamic dual-homing protection in WDM mesh networks.

Vinod Vokkarane, Jianping Wang, Xiangtong Qi, Raja Jothi, Balaji Raghavachari, Jason P. Jue

Proceedings of IEEE International Conference on Communications, 2004

Load balancing for reliable multicast.

Chao Gong, Ovidiu Daescu, Raja Jothi, Balaji Raghavachari, Kamil Saraç

Proceedings of the IASTED International Conference on Communications, Internet, and Information Technology, November 22, 2004

2003

A 5/4-approximation algorithm for minimum 2-edge-connectivity.

Raja Jothi, Balaji Raghavachari, Subramanian Varadarajan

Proceedings of the Fourteenth Annual ACM-SIAM Symposium on Discrete Algorithms, 2003