Rainer Breitling
Orcid: 0000-0001-7173-0922Affiliations:
- University of Groningen, Netherlands
According to our database1,
Rainer Breitling
authored at least 45 papers
between 2004 and 2020.
Collaborative distances:
Collaborative distances:
Timeline
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Online presence:
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on zbmath.org
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on orcid.org
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on d-nb.info
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Bibliography
2020
Unravelling the γ-butyrolactone network in Streptomyces coelicolor by computational ensemble modelling.
PLoS Comput. Biol., 2020
2018
2017
antiSMASH 4.0 - improvements in chemistry prediction and gene cluster boundary identification.
Nucleic Acids Res., 2017
RankProd 2.0: a refactored bioconductor package for detecting differentially expressed features in molecular profiling datasets.
Bioinform., 2017
2015
antiSMASH 3.0 - a comprehensive resource for the genome mining of biosynthetic gene clusters.
Nucleic Acids Res., 2015
TrypanoCyc: a community-led biochemical pathways database for <i>Trypanosoma brucei</i>.
Nucleic Acids Res., 2015
Incorporating peak grouping information for alignment of multiple liquid chromatography-mass spectrometry datasets.
Bioinform., 2015
2014
Pep2Path: Automated Mass Spectrometry-Guided Genome Mining of Peptidic Natural Products.
PLoS Comput. Biol., 2014
A fast algorithm for determining bounds and accurate approximate p-values of the rank product statistic for replicate experiments.
BMC Bioinform., 2014
MetAssign: probabilistic annotation of metabolites from LC-MS data using a Bayesian clustering approach.
Bioinform., 2014
2013
Handling Uncertainty in Dynamic Models: The Pentose Phosphate Pathway in <i>Trypanosoma brucei</i>.
PLoS Comput. Biol., 2013
antiSMASH 2.0 - a versatile platform for genome mining of secondary metabolite producers.
Nucleic Acids Res., 2013
<i>Computation</i>: A New Open Access Journal of Computational Chemistry, Computational Biology and Computational Engineering.
Comput., 2013
mzMatch-ISO: an R tool for the annotation and relative quantification of isotope-labelled mass spectrometry data.
Bioinform., 2013
2012
Dynamic Modelling under Uncertainty: The Case of <i>Trypanosoma brucei</i> Energy Metabolism.
PLoS Comput. Biol., 2012
Bioinform., 2012
2011
antiSMASH: rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences.
Nucleic Acids Res., 2011
2010
A circuit model of the temporal pattern generator of Caenorhabditis egg-laying behavior.
BMC Syst. Biol., 2010
DiffCoEx: a simple and sensitive method to find differentially coexpressed gene modules.
BMC Bioinform., 2010
2009
designGG: an R-package and web tool for the optimal design of genetical genomics experiments.
BMC Bioinform., 2009
Bioinform., 2009
Proceedings of the Formal Methods in Molecular Biology, 22.02. - 27.02.2009, 2009
Proceedings of the Formal Methods in Molecular Biology, 22.02. - 27.02.2009, 2009
Proceedings of the Formal Methods in Molecular Biology, 22.02. - 27.02.2009, 2009
2008
Bioinform., 2008
A comparison of meta-analysis methods for detecting differentially expressed genes in microarray experiments.
Bioinform., 2008
A structured approach for the engineering of biochemical network models, illustrated for signalling pathways.
Briefings Bioinform., 2008
An Introduction to BioModel Engineering, Illustrated for Signal Transduction Pathways.
Proceedings of the Membrane Computing - 9th International Workshop, 2008
2007
A verification protocol for the probe sequences of Affymetrix genome arrays reveals high probe accuracy for studies in mouse, human and rat.
BMC Bioinform., 2007
FIVA: Functional Information Viewer and Analyzer extracting biological knowledge from transcriptome data of prokaryotes.
Bioinform., 2007
Analysis of Tiling Microarray Data by Learning Vector Quantization and Relevance Learning.
Proceedings of the Intelligent Data Engineering and Automated Learning, 2007
Discriminating Microbial Species Using Protein Sequence Properties and Machine Learning.
Proceedings of the Intelligent Data Engineering and Automated Learning, 2007
2006
RankProd: a bioconductor package for detecting differentially expressed genes in meta-analysis.
Bioinform., 2006
2005
IEEE ACM Trans. Comput. Biol. Bioinform., 2005
Rank-based Methods as a Non-parametric Alternative of the T-statistic for the Analysis of Biological Microarray Data.
J. Bioinform. Comput. Biol., 2005
Int. J. Neural Syst., 2005
BMC Bioinform., 2005
Vector analysis as a fast and easy method to compare gene expression responses between different experimental backgrounds.
BMC Bioinform., 2005
2004
BMC Bioinform., 2004
Iterative Group Analysis (iGA): A simple tool to enhance sensitivity and facilitate interpretation of microarray experiments.
BMC Bioinform., 2004