Rafael Silva-Rocha

According to our database, Rafael Silva-Rocha authored at least 4 papers between 2011 and 2022.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of five.

2022

ChiMera: an easy to use pipeline for bacterial genome based metabolic network reconstruction, evaluation and visualization.

Gustavo Tamasco, Manish Kumar, Karsten Zengler, Rafael Silva-Rocha, Ricardo Roberto da Silva

BMC Bioinform., 2022

2013

The Standard European Vector Architecture (SEVA): a coherent platform for the analysis and deployment of complex prokaryotic phenotypes.

Rafael Silva-Rocha, Esteban Martínez-García, Belén Calles, Max Chavarría, Alejandro Arce-Rodríguez, Aitor de las Heras, A. David Páez-Espino, Gonzalo Durante-Rodríguez, Juhyun Kim, Pablo I. Nikel, Raúl Platero, Victor de Lorenzo

Nucleic Acids Res., 2013

2012

Bacteria as Computers: Formalizing Transcriptional Regulatory Networks by Way of Digital Logic Circuits.

Rafael Silva-Rocha, Victor de Lorenzo

Int. J. Unconv. Comput., 2012

2011

The logic layout of the TOL network of Pseudomonas putida pWW0 plasmid stems from a metabolic amplifier motif (MAM) that optimizes biodegradation of m-xylene.

Rafael Silva-Rocha, Hidde de Jong, Javier Tamames, Víctor de Lorenzo

BMC Syst. Biol., 2011