Rachel Karchin
Orcid: 0000-0002-5069-1239
According to our database1,
Rachel Karchin
authored at least 27 papers
between 1998 and 2024.
Collaborative distances:
Collaborative distances:
Timeline
2000
2005
2010
2015
2020
0
1
2
3
4
5
1
1
1
1
2
1
1
1
3
3
1
1
1
2
1
1
1
1
1
1
1
Legend:
Book In proceedings Article PhD thesis Dataset OtherLinks
Online presence:
-
on orcid.org
On csauthors.net:
Bibliography
2024
2023
Deep neural networks predict class I major histocompatibility complex epitope presentation and transfer learn neoepitope immunogenicity.
Nat. Mac. Intell., August, 2023
2022
Estimation of cancer cell fractions and clone trees from multi-region sequencing of tumors.
Bioinform., 2022
2017
A novel approach for selecting combination clinical markers of pathology applied to a large retrospective cohort of surgically resected pancreatic cysts.
J. Am. Medical Informatics Assoc., 2017
2016
Towards Increasing the Clinical Relevance of In Silico Methods to Predict Pathogenic Missense Variants.
PLoS Comput. Biol., 2016
Genome Landscapes of Disease: Strategies to Predict the Phenotypic Consequences of Human Germline and Somatic Variation.
PLoS Comput. Biol., 2016
2015
SubClonal Hierarchy Inference from Somatic Mutations: Automatic Reconstruction of Cancer Evolutionary Trees from Multi-region Next Generation Sequencing.
PLoS Comput. Biol., 2015
2014
PLoS Comput. Biol., 2014
2013
Proceedings of the Biocomputing 2013: Proceedings of the Pacific Symposium, 2013
2012
Proceedings of the Biocomputing 2012: Proceedings of the Pacific Symposium, 2012
2011
Network Models of TEM β-Lactamase Mutations Coevolving under Antibiotic Selection Show Modular Structure and Anticipate Evolutionary Trajectories.
PLoS Comput. Biol., 2011
CHASM and SNVBox: toolkit for detecting biologically important single nucleotide mutations in cancer.
Bioinform., 2011
Proceedings of the Biocomputing 2011: Proceedings of the Pacific Symposium, 2011
2009
MODBASE, a database of annotated comparative protein structure models and associated resources.
Nucleic Acids Res., 2009
Bioinform., 2009
2008
Bioinform., 2008
2007
PLoS Comput. Biol., 2007
Proceedings of the Biocomputing 2007, 2007
2006
MODBASE: a database of annotated comparative protein structure models and associated resources.
Nucleic Acids Res., 2006
2005
Calibrating <i>E</i>-values for hidden Markov models using reverse-sequence null models.
Bioinform., 2005
LS-SNP: large-scale annotation of coding non-synonymous SNPs based on multiple information sources.
Bioinform., 2005
Proceedings of the Biocomputing 2005, 2005
2002
Bioinform., 2002
1998