Prashanti Manda

According to our database, Prashanti Manda authored at least 30 papers between 2009 and 2023.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2023

Editorial: AI and data science in drug development and public health: Highlights from the MCBIOS 2022 conference.

Ramin Homayouni, Prashanti Manda, Aik Choon Tan, Zhaohui S. Qin

Frontiers Big Data, January, 2023

Using Ontology Embeddings With Deep Learning Architectures to Improve Prediction of Ontology Concepts From Literature.

Pratik Devkota, Somya D. Mohanty, Prashanti Manda

Proceedings of the International Conference on Biomedical Ontologies 2023 together with the Workshop on Ontologies for Infectious and Immune-Mediated Disease Data Science (OIIDDS 2023) and the FAIR Ontology Harmonization and TRUST Data Interoperability Workshop (FOHTI 2023), Brasília, Brazil, August 28, 2023

Ontology-Powered Boosting for Improved Recognition of Ontology Concepts from Biological Literature.

Pratik Devkota, Somya D. Mohanty, Prashanti Manda

Proceedings of the 16th International Joint Conference on Biomedical Engineering Systems and Technologies, 2023

2022

Machine learning for predicting readmission risk among the frail: Explainable AI for healthcare.

Somya D. Mohanty, Deborah Lekan, Thomas P. McCoy, Marjorie Jenkins, Prashanti Manda

Patterns, 2022

Editorial: Unleashing Innovation on Precision Public Health-Highlights From the MCBIOS and MAQC 2021 Joint Conference.

Ramin Homayouni, Huixiao Hong, Prashanti Manda, Bindu Nanduri, Inimary T. Toby

Frontiers Artif. Intell., 2022

A Gated Recurrent Unit based architecture for recognizing ontology concepts from biological literature.

Pratik Devkota, Somya D. Mohanty, Prashanti Manda

BioData Min., 2022

Knowledge of the Ancestors: Intelligent Ontology-aware Annotation of Biological Literature using Semantic Similarity.

Pratik Devkota, Somya D. Mohanty, Prashanti Manda

Proceedings of the International Conference on Biomedical Ontology 2022 (ICBO), Ann Arbor, Michigan, USA, September 25, 2022

2020

Data mining powered by the gene ontology.

Prashanti Manda

WIREs Data Mining Knowl. Discov., 2020

Automated ontology-based annotation of scientific literature using deep learning.

Prashanti Manda, Saed SayedAhmed, Somya D. Mohanty

Proceedings of The International Workshop on Semantic Big Data, 2020

A multi-modal machine learning approach towards predicting patient readmission.

Somya D. Mohanty, Thomas P. McCoy, Prashanti Manda, Deborah Lekan, Marjorie Jenkins

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2020

2019

Avoiding "conflicts of interest": A computational approach to scheduling parallel conference tracks and its human evaluation.

Prashanti Manda, Alexander Hahn, Katherine Lamm, Scott Provan, Todd J. Vision

PeerJ Prepr., 2019

Avoiding "conflicts of interest": a computational approach to scheduling parallel conference tracks and its human evaluation.

Prashanti Manda, Alexander Hahn, Katherine Beekman, Todd J. Vision

PeerJ Comput. Sci., 2019

Proceedings of the 2018 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) conference.

Jonathan D. Wren, Robert J. Doerksen, Inimary T. Toby, Bindu Nanduri, Ramin Homayouni, Prashanti Manda, Shraddha Thakkar

BMC Bioinform., 2019

Ontology-powered Semantic Similarity of Biological and Biomedical Entities - The Story So Far, and The Road Ahead.

Prashanti Manda

Proceedings of the 12th International Joint Conference on Biomedical Engineering Systems and Technologies (BIOSTEC 2019), 2019

2018

Phenoscape: Semantic analysis of organismal traits and genes yields insights in evolutionary biology.

Paula M. Mabee, Wasila M. Dahdul, James P. Balhoff, Hilmar Lapp, Prashanti Manda, Josef C. Uyeda, Todd J. Vision, Monte Westerfield

Proceedings of the Application of Semantic Technology in Biodiversity Science, 2018

Comparison of natural language processing tools for automatic gene ontology annotation of scientific literature.

Lucas Beasley, Prashanti Manda

PeerJ Prepr., 2018

Annotation of phenotypes using ontologies: a gold standard for the training and evaluation of natural language processing systems.

Wasila M. Dahdul, Prashanti Manda, Hong Cui, James P. Balhoff, T. Alexander Dececchi, Nizar Ibrahim, Hilmar Lapp, Todd J. Vision, Paula M. Mabee

Database J. Biol. Databases Curation, 2018

On the Statistical Sensitivity of Semantic Similarity Metrics.

Prashanti Manda, Todd J. Vision

Proceedings of the 9th International Conference on Biological Ontology (ICBO 2018), 2018

Taking a Dive: Experiments in Deep Learning for Automatic Ontology-Based Annotation of Scientific Literature.

Prashanti Manda, Lucas Beasley, Somya D. Mohanty

Proceedings of the 9th International Conference on Biological Ontology (ICBO 2018), 2018

2017

Proceedings of the 2017 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference.

Jonathan D. Wren, Mikhail G. Dozmorov, Inimary T. Toby, Bindu Nanduri, Ramin Homayouni, Prashanti Manda, Shraddha Thakkar

BMC Bioinform., 2017

Evolution of anatomical concept usage over time: mining 200 years of biodiversity literature.

Prashanti Manda, Todd J. Vision

Proceedings of The International Workshop on Semantic Big Data, 2017

What's Hot and What's Not? - Exploring Trends in Bioinformatics Literature Using Topic Modeling and Keyword Analysis.

Alexander Hahn, Somya D. Mohanty, Prashanti Manda

Proceedings of the Bioinformatics Research and Applications - 13th International Symposium, 2017

2016

The digital revolution in phenotyping.

Anika Oellrich, Nigel Collier, Tudor Groza, Dietrich Rebholz-Schuhmann, Nigam Shah, Olivier Bodenreider, Mary Regina Boland, Ivo I. Georgiev, Hongfang Liu, Kevin M. Livingston, Augustin Luna, Ann-Marie Mallon, Prashanti Manda, Peter N. Robinson, Gabriella Rustici, Michelle Simon, Liqin Wang, Rainer Winnenburg, Michel Dumontier

Briefings Bioinform., 2016

Investigating the Importance of Anatomical Homology for Cross-Species Phenotype Comparisons Using Semantic Similarity.

Prashanti Manda, Christopher J. Mungall, James P. Balhoff, Hilmar Lapp, Todd J. Vision

Proceedings of the Biocomputing 2016: Proceedings of the Pacific Symposium, 2016

Measuring the Importance of Annotation Granularity to the Detection of Semantic Similarity Between Phenotype Profiles.

Prashanti Manda, James P. Balhoff, Todd J. Vision

Proceedings of the Joint International Conference on Biological Ontology and BioCreative, 2016

2015

Information Theoretic Interestingness Measures for Cross-Ontology Data Mining in the Mouse Anatomy Ontology and the Gene Ontology.

Prashanti Manda, Fiona M. McCarthy, Bindu Nanduri, Susan M. Bridges

CoRR, 2015

2013

Interestingness measures and strategies for mining multi-ontology multi-level association rules from gene ontology annotations for the discovery of new GO relationships.

Prashanti Manda, Fiona M. McCarthy, Susan M. Bridges

J. Biomed. Informatics, 2013

2011

AgBase: supporting functional modeling in agricultural organisms.

Fiona M. McCarthy, Cathy R. Gresham, Teresia J. Buza, Philippe Chouvarine, Lakshmi R. Pillai, Ranjit Kumar, Seval Ozkan, Hui Wang, Prashanti Manda, Tony Arick, Susan M. Bridges, Shane C. Burgess

Nucleic Acids Res., 2011

2010

GOModeler- A tool for hypothesis-testing of functional genomics datasets.

Prashanti Manda, McKinley G. Freeman, Susan M. Bridges, T. J. Jankun-Kelly, Bindu Nanduri, Fiona M. McCarthy, Shane C. Burgess

BMC Bioinform., 2010

2009

Comparing gene annotation enrichment tools for functional modeling of agricultural microarray data.

Bart H. J. van den Berg, Chamali Thanthiriwatte, Prashanti Manda, Susan M. Bridges

BMC Bioinform., 2009