Pietro Di Lena

According to our database, Pietro Di Lena authored at least 41 papers between 2006 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2024

Where are we in the implementation of tissue-specific epigenetic clocks?

Claudia Sala, Pietro Di Lena, Danielle Fernandes Durso, Ìtalo Faria do Valle, Maria Giulia Bacalini, Daniele Dall'Olio, Claudio Franceschi, Gastone C. Castellani, Paolo Garagnani, Christine Nardini

Frontiers Bioinform., 2024

Editorial: Computational methods for analysis of DNA methylation data, volume II.

Pietro Di Lena, Christine Nardini, Matteo Pellegrini

Frontiers Bioinform., 2024

2022

Editorial: Computational Methods for Analysis of DNA Methylation Data.

Pietro Di Lena, Christine Nardini, Matteo Pellegrini

Frontiers Bioinform., 2022

Evaluation of different computational methods for DNA methylation-based biological age.

Pietro Di Lena, Claudia Sala, Christine Nardini

Briefings Bioinform., 2022

2021

Estimage: a webserver hub for the computation of methylation age.

Pietro Di Lena, Claudia Sala, Christine Nardini

Nucleic Acids Res., 2021

Fold recognition by scoring protein maps using the congruence coefficient.

Pietro Di Lena, Pierre Baldi

Bioinform., 2021

2020

Topological dynamics of Nondeterministic Cellular Automata.

Pietro Di Lena

Inf. Comput., 2020

Methylation data imputation performances under different representations and missingness patterns.

Pietro Di Lena, Claudia Sala, Andrea Prodi, Christine Nardini

BMC Bioinform., 2020

2019

On combining Big Data and machine learning to support eco-driving behaviours.

Giovanni Delnevo, Pietro Di Lena, Silvia Mirri, Catia Prandi, Paola Salomoni

J. Big Data, 2019

Missing value estimation methods for DNA methylation data.

Pietro Di Lena, Claudia Sala, Andrea Prodi, Christine Nardini

Bioinform., 2019

2017

In-vehicle Human Machine Interface: An Approach to Enhance Eco-Driving Behaviors.

Pietro Di Lena, Silvia Mirri, Catia Prandi, Paola Salomoni, Giovanni Delnevo

Proceedings of the 2017 ACM Workshop on Interacting with Smart Objects, 2017

Equicontinuity and Sensitivity of Nondeterministic Cellular Automata.

Pietro Di Lena

Proceedings of the Cellular Automata and Discrete Complex Systems, 2017

2016

NET-GE: a web-server for NETwork-based human gene enrichment.

Samuele Bovo, Pietro Di Lena, Pier Luigi Martelli, Piero Fariselli, Rita Casadio

Bioinform., 2016

2015

GOTA: GO term annotation of biomedical literature.

Pietro di Lena, Giacomo Domeniconi, Luciano Margara, Gianluca Moro

BMC Bioinform., 2015

Mechanotransduction map: simulation model, molecular pathway, gene set.

Jennifer E. Dent, Valentina Devescovi, Han Li, Pietro Di Lena, Youtao Lu, Yuanhua Liu, Christine Nardini

Bioinform., 2015

2014

Nondeterministic Cellular Automata.

Pietro Di Lena, Luciano Margara

Inf. Sci., 2014

2013

Periodic Orbits and Dynamical Complexity in Cellular Automata.

Alberto Dennunzio, Pietro Di Lena, Enrico Formenti, Luciano Margara

Fundam. Informaticae, 2013

MIMO: an efficient tool for molecular interaction maps overlap.

Pietro Di Lena, Gang Wu, Pier Luigi Martelli, Rita Casadio, Christine Nardini

BMC Bioinform., 2013

2012

On the Undecidability of Attractor Properties for Cellular Automata.

Pietro di Lena, Luciano Margara

Fundam. Informaticae, 2012

Strictly Temporally Periodic Points in Cellular Automata

Alberto Dennunzio, Pietro di Lena, Luciano Margara

Proceedings of the Proceedings 18th international workshop on Cellular Automata and Discrete Complex Systems and 3rd international symposium Journées Automates Cellulaires, 2012

Deep architectures for protein contact map prediction.

Pietro di Lena, Ken Nagata, Pierre Baldi

Bioinform., 2012

Deep Spatio-Temporal Architectures and Learning for Protein Structure Prediction.

Pietro Di Lena, Pierre Baldi, Ken Nagata

Proceedings of the Advances in Neural Information Processing Systems 25: 26th Annual Conference on Neural Information Processing Systems 2012. Proceedings of a meeting held December 3-6, 2012

2011

Is There an Optimal Substitution Matrix for Contact Prediction with Correlated Mutations?

Pietro di Lena, Piero Fariselli, Luciano Margara, Marco Vassura, Rita Casadio

IEEE ACM Trans. Comput. Biol. Bioinform., 2011

Blurring contact maps of thousands of proteins: what we can learn by reconstructing 3D structure.

Marco Vassura, Pietro di Lena, Luciano Margara, Maria Mirto, Giovanni Aloisio, Piero Fariselli, Rita Casadio

BioData Min., 2011

Divide and Conquer Strategies for Protein Structure Prediction.

Pietro di Lena, Piero Fariselli, Luciano Margara, Marco Vassura, Rita Casadio

Proceedings of the Mathematical Approaches to Polymer Sequence Analysis and Related Problems, 2011

2010

On the undecidability of the limit behavior of Cellular Automata.

Pietro di Lena, Luciano Margara

Theor. Comput. Sci., 2010

Optimal global alignment of signals by maximization of Pearson correlation.

Pietro di Lena, Luciano Margara

Inf. Process. Lett., 2010

Fast overlapping of protein contact maps by alignment of eigenvectors.

Pietro di Lena, Piero Fariselli, Luciano Margara, Marco Vassura, Rita Casadio

Bioinform., 2010

2009

On the directional dynamics of additive cellular automata.

Alberto Dennunzio, Pietro di Lena, Enrico Formenti, Luciano Margara

Theor. Comput. Sci., 2009

On the Reconstruction of Three-dimensional Protein Structures from Contact Maps.

Pietro di Lena, Marco Vassura, Luciano Margara, Piero Fariselli, Rita Casadio

Algorithms, 2009

On the Upper Bound of the Prediction Accuracy of Residue Contacts in Proteins with Correlated Mutations: The Case Study of the Similarity Matrices.

Pietro di Lena, Piero Fariselli, Luciano Margara, Marco Vassura, Rita Casadio

Proceedings of the Algorithms in Bioinformatics, 9th International Workshop, 2009

Undecidable Properties of Limit Set Dynamics of Cellular Automata.

Pietro di Lena, Luciano Margara

Proceedings of the 26th International Symposium on Theoretical Aspects of Computer Science, 2009

2008

Reconstruction of 3D Structures From Protein Contact Maps.

Marco Vassura, Luciano Margara, Pietro di Lena, Filippo Medri, Piero Fariselli, Rita Casadio

IEEE ACM Trans. Comput. Biol. Bioinform., 2008

Computational complexity of dynamical systems: The case of cellular automata.

Pietro di Lena, Luciano Margara

Inf. Comput., 2008

FT-COMAR: fault tolerant three-dimensional structure reconstruction from protein contact maps.

Marco Vassura, Luciano Margara, Pietro di Lena, Filippo Medri, Piero Fariselli, Rita Casadio

Bioinform., 2008

Classification of directional dynamics for additive cellular automata.

Alberto Dennunzio, Pietro di Lena, Enrico Formenti, Luciano Margara

Proceedings of the First Symposium on Cellular Automata "Journées Automates Cellulaires" (JAC 2008), 2008

A New Protein Representation Based on Fragment Contacts: Towards an Improvement of Contact Maps Predictions.

Pietro di Lena, Luciano Margara, Marco Vassura, Piero Fariselli, Rita Casadio

Proceedings of the Computational Intelligence Methods for Bioinformatics and Biostatistics, 2008

2007

Row Subshifts and Topological Entropy of Cellular Automata.

Pietro di Lena, Luciano Margara

J. Cell. Autom., 2007

On Computing the Topological Entropy of One-sided Cellular Automata.

Pietro di Lena

J. Cell. Autom., 2007

Fault Tolerance for Large Scale Protein 3D Reconstruction from Contact Maps.

Marco Vassura, Luciano Margara, Pietro di Lena, Filippo Medri, Piero Fariselli, Rita Casadio

Proceedings of the Algorithms in Bioinformatics, 7th International Workshop, 2007

2006

Decidable Properties for Regular Cellular Automata.

Pietro di Lena

Proceedings of the Fourth IFIP International Conference on Theoretical Computer Science (TCS 2006), 2006