Pieter C. Dorrestein

According to our database, Pieter C. Dorrestein authored at least 11 papers between 2008 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2023

DeepSAT: Learning Molecular Structures from Nuclear Magnetic Resonance Data.

Hyun Woo Kim, Chen Zhang, Raphael Reher, Mingxun Wang, Kelsey L. Alexander, Louis-Félix Nothias, Yoo Kyong Han, Hyeji Shin, Ki Yong Lee, Kyu Hyeong Lee, Myeong Ji Kim, Pieter C. Dorrestein, William H. Gerwick, Garrison W. Cottrell

J. Cheminformatics, December, 2023

Improving annotation propagation on molecular networks through random walks: introducing ChemWalker.

Tiago Cabral Borelli, Gabriel Santos Arini, Luís G. P. Feitosa, Pieter C. Dorrestein, Norberto Peporine Lopes, Ricardo Roberto da Silva

Bioinform., March, 2023

2020

Publisher Correction: Database-independent molecular formula annotation using Gibbs sampling through ZODIAC.

Marcus Ludwig, Louis-Félix Nothias, Kai Dührkop, Irina Koester, Markus Fleischauer, Martin A. Hoffmann, Daniel Petras, Fernando Vargas, Mustafa Morsy, Lihini Aluwihare, Pieter C. Dorrestein, Sebastian Böcker

Nat. Mach. Intell., 2020

Database-independent molecular formula annotation using Gibbs sampling through ZODIAC.

Marcus Ludwig, Louis-Félix Nothias, Kai Dührkop, Irina Koester, Markus Fleischauer, Martin A. Hoffmann, Daniel Petras, Fernando Vargas, Mustafa Morsy, Lihini Aluwihare, Pieter C. Dorrestein, Sebastian Böcker

Nat. Mach. Intell., 2020

2019

Predicting proteome allocation, overflow metabolism, and metal requirements in a model acetogen.

Joanne K. Liu, Colton J. Lloyd, Mahmoud M. Al-Bassam, Ali Ebrahim, Ji-Nu Kim, Connor A. Olson, Alexander Aksenov, Pieter C. Dorrestein, Karsten Zengler

PLoS Comput. Biol., 2019

De Novo Peptide Sequencing Reveals a Vast Cyclopeptidome in Human Gut and Other Environments.

Bahar Behsaz, Hosein Mohimani, Alexey A. Gurevich, Andrey D. Prjibelski, Mark F. Fisher, Larry Smarr, Pieter C. Dorrestein, Joshua S. Mylne, Pavel A. Pevzner

Proceedings of the Research in Computational Molecular Biology, 2019

2018

Propagating annotations of molecular networks using in silico fragmentation.

Ricardo Roberto da Silva, Mingxun Wang, Louis-Félix Nothias, Justin J. J. van der Hooft, Andrés Mauricio Caraballo-Rodríguez, Evan Fox, Marcy J. Balunas, Jonathan L. Klassen, Norberto Peporine Lopes, Pieter C. Dorrestein

PLoS Comput. Biol., 2018

2017

Computational Metabolomics: Identification, Interpretation, Imaging (Dagstuhl Seminar 17491).

Theodore Alexandrov, Sebastian Böcker, Pieter C. Dorrestein, Emma Schymanski

Dagstuhl Reports, 2017

2014

Pep2Path: Automated Mass Spectrometry-Guided Genome Mining of Peptidic Natural Products.

Marnix H. Medema, Yared Paalvast, Don D. Nguyen, Alexey Melnik, Pieter C. Dorrestein, Eriko Takano, Rainer Breitling

PLoS Comput. Biol., 2014

2011

Multiplex De Novo Sequencing of Peptide Antibiotics.

Hosein Mohimani, Wei-Ting Liu, Yu-Liang Yang, Susana P. Gaudêncio, William Fenical, Pieter C. Dorrestein, Pavel A. Pevzner

J. Comput. Biol., 2011

2008

De Novo Sequencing of Nonribosomal Peptides.

Nuno Bandeira, Julio Ng, Dario Meluzzi, Roger G. Linington, Pieter C. Dorrestein, Pavel A. Pevzner

Proceedings of the Research in Computational Molecular Biology, 2008