Philippe Veber

According to our database, Philippe Veber authored at least 18 papers between 2004 and 2023.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2023

Neural Networks beyond explainability: Selective inference for sequence motifs.

Antoine Villié, Philippe Veber, Yohann de Castro, Laurent Jacob

Trans. Mach. Learn. Res., 2023

2019

CAARS: comparative assembly and annotation of RNA-Seq data.

Carine Rey, Philippe Veber, Bastien Boussau, Marie Sémon

Bioinform., 2019

2012

BioNLP Shared Task - The Bacteria Track.

Robert Bossy, Julien Jourde, Alain-Pierre Manine, Philippe Veber, Érick Alphonse, Maarten van de Guchte, Philippe Bessières, Claire Nedellec

BMC Bioinform., 2012

2011

Detecting inconsistencies in large biological networks with answer set programming.

Martin Gebser, Torsten Schaub, Sven Thiele, Philippe Veber

Theory Pract. Log. Program., 2011

BioNLP 2011 Task Bacteria Biotope - The Alvis system.

Zorana Ratkovic, Wiktoria Golik, Pierre Warnier, Philippe Veber, Claire Nédellec

Proceedings of BioNLP Shared Task 2011 Workshop, Portland, Oregon, USA, June 24, 2011, 2011

BioNLP Shared Task 2011 - Bacteria Gene Interactions and Renaming.

Julien Jourde, Alain-Pierre Manine, Philippe Veber, Karën Fort, Robert Bossy, Érick Alphonse, Philippe Bessières

Proceedings of BioNLP Shared Task 2011 Workshop, Portland, Oregon, USA, June 24, 2011, 2011

2010

Repair and Prediction (under Inconsistency) in Large Biological Networks with Answer Set Programming.

Martin Gebser, Carito Guziolowski, Mihail Ivanchev, Torsten Schaub, Anne Siegel, Sven Thiele, Philippe Veber

Proceedings of the Principles of Knowledge Representation and Reasoning: Proceedings of the Twelfth International Conference, 2010

The BioASP Library: ASP Solutions for Systems Biology.

Martin Gebser, Arne König, Torsten Schaub, Sven Thiele, Philippe Veber

Proceedings of the 22nd IEEE International Conference on Tools with Artificial Intelligence, 2010

2008

Lagrangian approaches for a class of matching problems in computational biology.

Nicola Yanev, Rumen Andonov, Philippe Veber, Stefan Balev

Comput. Math. Appl., 2008

Inferring the role of transcription factors in regulatory networks.

Philippe Veber, Carito Guziolowski, Michel Le Borgne, Ovidiu Radulescu, Anne Siegel

BMC Bioinform., 2008

The System BioC for Reasoning about Biological Models in Action Language C.

Steve Dworschak, Torsten Grote, Arne König, Torsten Schaub, Philippe Veber

Proceedings of the 20th IEEE International Conference on Tools with Artificial Intelligence (ICTAI 2008), 2008

Detecting Inconsistencies in Large Biological Networks with Answer Set Programming.

Martin Gebser, Torsten Schaub, Sven Thiele, Björn Usadel, Philippe Veber

Proceedings of the Logic Programming, 24th International Conference, 2008

2007

Modélisation grande échelle de réseaux biologiques :vérification par contraintes booléennes de la cohérence des données. (Large-scale modeling of biological networks: checking data consistency using boolean constraints).

Philippe Veber

PhD thesis, 2007

Path-Equivalent Developments in Acyclic Weighted Automata.

Mathieu Giraud, Philippe Veber, Dominique Lavenier

Int. J. Found. Comput. Sci., 2007

2006

Path-Equivalent Removals of <i>epsilon</i>-transitions in a Genomic Weighted Finite Automaton.

Mathieu Giraud, Philippe Veber, Dominique Lavenier

Proceedings of the Implementation and Application of Automata, 2006

2005

Dynamic programming for LR-PCR segmentation of bacterium genomes.

Rumen Andonov, Dominique Lavenier, Philippe Veber, Nicola Yanev

Concurr. Comput. Pract. Exp., 2005

Optimal Protein Threading by Cost-Splitting.

Philippe Veber, Nicola Yanev, Rumen Andonov, Vincent Poirriez

Proceedings of the Algorithms in Bioinformatics, 5th International Workshop, 2005

2004

Dynamic Programming for LR-PCR Segmention of Bacterium Genomes.

Rumen Andonov, Dominique Lavenier, Philippe Veber, Nicola Yanev

Proceedings of the 18th International Parallel and Distributed Processing Symposium (IPDPS 2004), 2004