Philippe Hupé

According to our database, Philippe Hupé authored at least 11 papers between 2004 and 2020.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2020

<i>biogitflow</i>: development workflow protocols for bioinformatics pipelines with git and GitLab.

Choumouss Kamoun, Julien Roméjon, Henri de Soyres, Apolline Gallois, Elodie Girard, Philippe Hupé

F1000Research, 2020

QUARTIC: QUick pArallel algoRithms for high-Throughput sequencIng data proCessing.

Frédéric Jarlier, Nicolas Joly, Nicolas Fedy, Thomas Magalhaes, Leonor Sirotti, Paul Paganiban, Firmin Martin, Michael McManus, Philippe Hupé

F1000Research, 2020

2014

Multi-factor data normalization enables the detection of copy number aberrations in amplicon sequencing data.

Valentina Boeva, Tatiana G. Popova, Maxime Lienard, Sebastien Toffoli, Maud Kamal, Christophe Le Tourneau, David Gentien, Nicolas Servant, Pierre Gestraud, Thomas Rio Frio, Philippe Hupé, Emmanuel Barillot, Jean-François Laes

Bioinform., 2014

2011

SMETHILLIUM: spatial normalization METHod for ILLumina InfinIUM HumanMethylation BeadChip.

Camille Sabbah, Gildas Mazo, Caroline Paccard, Fabien Reyal, Philippe Hupé

Bioinform., 2011

2008

Biostatistical Algorithms for OMICS Data in oncology. Application to DNA copy number microarray Experiments.

Philippe Hupé

PhD thesis, 2008

ITALICS: an algorithm for normalization and DNA copy number calling for Affymetrix SNP arrays.

Guillem Rigaill, Philippe Hupé, Anna Almeida, Philippe La Rosa, Jean-Philippe Meyniel, Charles Decraene, Emmanuel Barillot

Bioinform., 2008

2006

CAPweb: a bioinformatics CGH array Analysis Platform.

Stéphane Liva, Philippe Hupé, Pierre Neuvial, Isabel Brito, Eric Viara, Philippe La Rosa, Emmanuel Barillot

Nucleic Acids Res., 2006

Spatial normalization of array-CGH data.

Pierre Neuvial, Philippe Hupé, Isabel Brito, Stéphane Liva, Elodie Manié, Caroline Brennetot, François Radvanyi, Alain Aurias, Emmanuel Barillot

BMC Bioinform., 2006

Computation of recurrent minimal genomic alterations from array-CGH data.

Céline Rouveirol, Nicolas Stransky, Philippe Hupé, Philippe La Rosa, Eric Viara, Emmanuel Barillot, François Radvanyi

Bioinform., 2006

VAMP: Visualization and analysis of array-CGH, transcriptome and other molecular profiles.

Philippe La Rosa, Eric Viara, Philippe Hupé, Gaëlle Pierron, Stéphane Liva, Pierre Neuvial, Isabel Brito, Séverine Lair, Nicolas Servant, Nicolas Robine, Elodie Manié, Caroline Brennetot, Isabelle Janoueix-Lerosey, Virginie Raynal, Nadège Gruel, Céline Rouveirol, Nicolas Stransky, Marc-Henri Stern, Olivier Delattre, Alain Aurias, François Radvanyi, Emmanuel Barillot

Bioinform., 2006

2004

Analysis of array CGH data: from signal ratio to gain and loss of DNA regions.

Philippe Hupé, Nicolas Stransky, Jean-Paul Thiery, François Radvanyi, Emmanuel Barillot

Bioinform., 2004