Philip C. Biggin

According to our database, Philip C. Biggin authored at least 15 papers between 2010 and 2024.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2024

Automated Absolute Binding Free Energy Calculation Workflow for Drug Discovery.

Benjamin Ries, Irfan Alibay, Nithishwer Mouroug Anand, Philip C. Biggin, Aniket Magarkar

J. Chem. Inf. Model., 2024

Analysis of Glycan Recognition by Concanavalin A Using Absolute Binding Free Energy Calculations.

Sondos Musleh, Irfan Alibay, Philip C. Biggin, Richard A. Bryce

J. Chem. Inf. Model., 2024

2023

Computed Protein-Protein Enthalpy Signatures as a Tool for Identifying Conformation Sampling Problems.

Süleyman Selim Çinaroglu, Philip C. Biggin

J. Chem. Inf. Model., October, 2023

2022

SAMPL7 protein-ligand challenge: A community-wide evaluation of computational methods against fragment screening and pose-prediction.

Harold Grosjean, Mehtap Isik, Anthony Aimon, David L. Mobley, John D. Chodera, Frank von Delft, Philip C. Biggin

J. Comput. Aided Mol. Des., 2022

Scoring Functions for Protein-Ligand Binding Affinity Prediction Using Structure-based Deep Learning: A Review.

Rocco Meli, Garrett M. Morris, Philip C. Biggin

Frontiers Bioinform., 2022

2021

State-dependent protein-lipid interactions of a pentameric ligand-gated ion channel in a neuronal membrane.

Marc A. Dämgen, Philip C. Biggin

PLoS Comput. Biol., 2021

Learning protein-ligand binding affinity with atomic environment vectors.

Rocco Meli, Andrew Anighoro, Michael J. Bodkin, Garrett M. Morris, Philip C. Biggin

J. Cheminformatics, 2021

2020

spyrmsd: symmetry-corrected RMSD calculations in Python.

Rocco Meli, Philip C. Biggin

J. Cheminformatics, 2020

2017

Statistical Analysis on the Performance of Molecular Mechanics Poisson-Boltzmann Surface Area versus Absolute Binding Free Energy Calculations: Bromodomains as a Case Study.

Matteo Aldeghi, Michael J. Bodkin, Stefan Knapp, Philip C. Biggin

J. Chem. Inf. Model., September, 2017

2016

Steered Molecular Dynamics Simulations Predict Conformational Stability of Glutamate Receptors.

Maria Musgaard, Philip C. Biggin

J. Chem. Inf. Model., 2016

The Fragment Molecular Orbital Method Reveals New Insight into the Chemical Nature of GPCR-Ligand Interactions.

Alexander Heifetz, Ewa I. Chudyk, Laura Gleave, Matteo Aldeghi, Vadim Cherezov, Dmitri G. Fedorov, Philip C. Biggin, Michael J. Bodkin

J. Chem. Inf. Model., 2016

2012

The Role of Flexibility and Conformational Selection in the Binding Promiscuity of PDZ Domains.

Márton Münz, Jotun Hein, Philip C. Biggin

PLoS Comput. Biol., 2012

JGromacs: A Java Package for Analyzing Protein Simulations.

Márton Münz, Philip C. Biggin

J. Chem. Inf. Model., 2012

2010

Dynamics based alignment of proteins: an alternative approach to quantify dynamic similarity.

Márton Münz, Rune B. Lyngsø, Jotun Hein, Philip C. Biggin

BMC Bioinform., 2010

Bookshelf: a simple curation system for the storage of biomolecular simulation data.

Shabana Vohra, Benjamin A. Hall, Daniel A. Holdbrook, Syma Khalid, Philip C. Biggin

Database J. Biol. Databases Curation, 2010