Diffusion Tensor Imaging and Axonal Tracking in the Human Brainstem. - Bram Stieltjes; Walter E. Kaufmann; Peter C. M. van Zijl; Kim Fredericksen; Godfrey D. Pearlson; Meiyappan Solaiyappan; Susumu Mori (NeuroImage, 2001)

Intervoxel Heterogeneity of Event-Related Functional Magnetic Resonance Imaging Responses as a Function of T1 Weighting. - Hanzhang Lu; Xavier Golay; Peter C. M. van Zijl (NeuroImage, 2002)

A Framework for Callosal Fiber Distribution Analysis. - Dongrong Xu; Susumu Mori; Meiyappan Solaiyappan; Peter C. M. van Zijl; Christos Davatzikos (NeuroImage, 2002)

Three-Dimensional Diffusion Tensor Magnetic Resonance Microimaging of Adult Mouse Brain and Hippocampus. - Jiangyang Zhang; Peter C. M. van Zijl; Susumu Mori (NeuroImage, 2002)

Three-dimensional anatomical characterization of the developing mouse brain by diffusion tensor microimaging. - Jiangyang Zhang; Linda J. Richards; Paul Yarowsky; Hao Huang; Peter C. M. van Zijl; Susumu Mori (NeuroImage, 2003)

DTI tractography based parcellation of white matter: Application to the mid-sagittal morphology of corpus callosum. - Hao Huang; Jiangyang Zhang; Hangyi Jiang; Setsu Wakana; Lidia Poetscher; Michael I. Miller; Peter C. M. van Zijl; Argye E. Hillis; Robert Wytik; Susumu Mori (NeuroImage, 2005)

Mapping postnatal mouse brain development with diffusion tensor microimaging. - Jiangyang Zhang; Michael I. Miller; Celine Plachez; Linda J. Richards; Paul Yarowsky; Peter C. M. van Zijl; Susumu Mori (NeuroImage, 2005)

Characterization of Mouse Brain and Its Development using Diffusion Tensor Imaging and Computational Techniques. - Jiangyang Zhang; Linda J. Richards; Michael I. Miller; Paul Yarowsky; Peter C. M. van Zijl; Susumu Mori (EMBC, 2006)

DtiStudio: Resource program for diffusion tensor computation and fiber bundle tracking. - Hangyi Jiang; Peter C. M. van Zijl; Jinsuh Kim; Godfrey D. Pearlson; Susumu Mori (Comput. Methods Programs Biomed., 2006)

Pediatric diffusion tensor imaging: Normal database and observation of the white matter maturation in early childhood. - Laurent Hermoye; Christine Saint-Martin; Guy Cosnard; Seung-Koo Lee; Jinna Kim; Marie-Cécile Nassogne; Renaud Menten; Philippe Clapuyt; Pamela K. Donohue; Kegang Hua; Setsu Wakana; Hangyi Jiang; et al. (NeuroImage, 2006)

White and gray matter development in human fetal, newborn and pediatric brains. - Hao Huang; Jiangyang Zhang; Setsu Wakana; Weihong Zhang; Tianbo Ren; Linda J. Richards; Paul Yarowsky; Pamela K. Donohue; Ernest Graham; Peter C. M. van Zijl; Susumu Mori (NeuroImage, 2006)

Multiparametric magnetic resonance imaging analysis of the corticospinal tract in multiple sclerosis. - Daniel S. Reich; Seth A. Smith; Kathleen M. Zackowski; Eliza M. Gordon-Lipkin; Craig K. Jones; Jonathan A. D. Farrell; Susumu Mori; Peter C. M. van Zijl; Peter A. Calabresi (NeuroImage, 2007)

Reproducibility of quantitative tractography methods applied to cerebral white matter. - Setsu Wakana; Arvind Caprihan; Martina M. Panzenboeck; James H. Fallon; Michele Perry; Randy L. Gollub; Kegang Hua; Jiangyang Zhang; Hangyi Jiang; Prachi Dubey; Ari Blitz; Peter C. M. van Zijl; et al. (NeuroImage, 2007)

Evidence of slow maturation of the superior longitudinal fasciculus in early childhood by diffusion tensor imaging. - Jiangyang Zhang; Alan C. Evans; Laurent Hermoye; Seung-Koo Lee; Setsu Wakana; Weihong Zhang; Pamela K. Donohue; Michael I. Miller; Hao Huang; Xiaoqing Wang; Peter C. M. van Zijl; Susumu Mori (NeuroImage, 2007)

Robust maximum likelihood estimation in Q-space MRI. - Bennett A. Landman; Jonathan A. D. Farrell; Seth A. Smith; Peter A. Calabresi; Peter C. M. van Zijl; Jerry L. Prince (ISBI, 2008)

Tract probability maps in stereotaxic spaces: Analyses of white matter anatomy and tract-specific quantification. - Kegang Hua; Jiangyang Zhang; Setsu Wakana; Hangyi Jiang; Xin Li 007; Daniel S. Reich; Peter A. Calabresi; James J. Pekar; Peter C. M. van Zijl; Susumu Mori (NeuroImage, 2008)

Stereotaxic white matter atlas based on diffusion tensor imaging in an ICBM template. - Susumu Mori; Kenichi Oishi; Hangyi Jiang; Li Jiang; Xin Li 007; Kazi Akhter; Kegang Hua; Andreia V. Faria; Asif Mahmood; Roger P. Woods; Arthur W. Toga; G. Bruce Pike; et al. (NeuroImage, 2008)

Human brain white matter atlas: Identification and assignment of common anatomical structures in superficial white matter. - Kenichi Oishi; Karl Zilles; Katrin Amunts; Andreia Faria; Hangyi Jiang; Xin Li 007; Kazi Akhter; Kegang Hua; Roger P. Woods; Arthur W. Toga; G. Bruce Pike; Pedro Rosa-Neto; et al. (NeuroImage, 2008)

Automated fiber tracking of human brain white matter using diffusion tensor imaging. - Weihong Zhang; Alessandro Olivi; Samuel J. Hertig; Peter C. M. van Zijl; Susumu Mori (NeuroImage, 2008)

Multi-contrast large deformation diffeomorphic metric mapping for diffusion tensor imaging. - Can Ceritoglu; Kenichi Oishi; Xin Li 007; Ming-Chung Chou; Laurent Younes; Marilyn S. Albert; Constantine Lyketsos; Peter C. M. van Zijl; Michael I. Miller; Susumu Mori (NeuroImage, 2009)

Regionally-specific diffusion tensor imaging in mild cognitive impairment and Alzheimer's disease. - Michelle M. Mielke; Nicholas A. Kozauer; Kwun Chuen Gary Chan; M. George; J. Toroney; M. Zerrate; Karen Bandeen-Roche; Mei-Cheng Wang; Peter C. M. van Zijl; James J. Pekar; Susumu Mori; Constantine G. Lyketsos; et al. (NeuroImage, 2009)

Atlas-based whole brain white matter analysis using large deformation diffeomorphic metric mapping: Application to normal elderly and Alzheimer's disease participants. - Kenichi Oishi; Andreia Faria; Hangyi Jiang; Xin Li 007; Kazi Akhter; Jiangyang Zhang; John T. Hsu; Michael I. Miller; Peter C. M. van Zijl; Marilyn S. Albert; Constantine Lyketsos; Roger P. Woods; et al. (NeuroImage, 2009)

Landmark-referenced voxel-based analysis of diffusion tensor images of the brainstem white matter tracts: Application in patients with middle cerebral artery stroke. - Weihong Zhang; Xin Li 007; Jiangyang Zhang; Andreas R. Luft; Daniel F. Hanley; Peter C. M. van Zijl; Michael I. Miller; Laurent Younes; Susumu Mori (NeuroImage, 2009)

Atlas-based analysis of neurodevelopment from infancy to adulthood using diffusion tensor imaging and applications for automated abnormality detection. - Andreia Faria; Jiangyang Zhang; Kenichi Oishi; Xin Li 007; Hangyi Jiang; Kazi Akhter; Laurent Hermoye; Seung-Koo Lee; Alexander Hoon; Elaine Stashinko; Michael I. Miller; Peter C. M. van Zijl; et al. (NeuroImage, 2010)

Atlas-guided tract reconstruction for automated and comprehensive examination of the white matter anatomy. - Yajing Zhang; Jiangyang Zhang; Kenichi Oishi; Andreia Faria; Hangyi Jiang; Xin Li 007; Kazi Akhter; Pedro Rosa-Neto; G. Bruce Pike; Alan C. Evans; Arthur W. Toga; Roger P. Woods; et al. (NeuroImage, 2010)

Superficially Located White Matter Structures Commonly Seen in the Human and the Macaque Brain with Diffusion Tensor Imaging. - Kenichi Oishi; Hao Huang; Takashi Yoshioka; Sarah H. Ying; David S. Zee; Karl Zilles; Katrin Amunts; Roger P. Woods; Arthur W. Toga; G. Bruce Pike; Pedro Rosa-Neto; Alan C. Evans; et al. (Brain Connect., 2011)

Diffuse Abnormality of Low to Moderately Organized White Matter in Schizophrenia. - Sarah A. J. Reading; Kenichi Oishi; Graham W. Redgrave; Julie McEntee; Megan Shanahan; Nadine Yoritomo; Laurent Younes; Susumu Mori; Michael I. Miller; Peter C. M. van Zijl; Russell L. Margolis; Christopher A. Ross (Brain Connect., 2011)

Erratum to "Quantitative analysis of brain pathology based on MRI and brain atlases - Applications for cerebral palsy" [NeuroImage 54/3 (2011) 1854-1861]. - Andreia Faria; Alexander Hoon; Elaine Stashinko; Xin Li 007; Hangyi Jiang; Ameneh Mashayekh; Kazi Akhter; John T. Hsu; Kenichi Oishi; Jiangyang Zhang; Michael I. Miller; Peter C. M. van Zijl; et al. (NeuroImage, 2011)

Quantitative analysis of brain pathology based on MRI and brain atlases - Applications for cerebral palsy. - Andreia Faria; Alexander Hoon; Elaine Stashinko; Xin Li 007; Hangyi Jiang; Ameneh Mashayekh; Kazi Akhter; John T. Hsu; Kenichi Oishi; Jiangyang Zhang; Michael I. Miller; Peter C. M. van Zijl; et al. (NeuroImage, 2011)

Multi-parametric neuroimaging reproducibility: A 3-T resource study. - Bennett A. Landman; Alan J. Huang; Aliya Gifford; Deepti S. Vikram; Issel Anne L. Lim; Jonathan A. D. Farrell; John A. Bogovic; Jun Hua; Min Chen 006; Samson Jarso; Seth A. Smith; Suresh Joel; et al. (NeuroImage, 2011)

Multi-contrast human neonatal brain atlas: Application to normal neonate development analysis. - Kenichi Oishi; Susumu Mori; Pamela K. Donohue; Thomas Ernst 001; Lynn Anderson; Steven Buchthal; Andreia Faria; Hangyi Jiang; Xin Li 007; Michael I. Miller; Peter C. M. van Zijl; Linda Chang (NeuroImage, 2011)

Atlas-based analysis of resting-state functional connectivity: Evaluation for reproducibility and multi-modal anatomy-function correlation studies. - Andreia Faria; Suresh Joel; Yajing Zhang; Kenichi Oishi; Peter C. M. van Zijl; Michael I. Miller; James J. Pekar; Susumu Mori (NeuroImage, 2012)

Mapping magnetic susceptibility anisotropies of white matter in vivo in the human brain at 7 T. - Xu Li 003; Deepti S. Vikram; Issel Anne L. Lim; Craig K. Jones; Jonathan A. D. Farrell; Peter C. M. van Zijl (NeuroImage, 2012)

A review of the development of Vascular-Space-Occupancy (VASO) fMRI. - Hanzhang Lu; Peter C. M. van Zijl (NeuroImage, 2012)

The BOLD post-stimulus undershoot, one of the most debated issues in fMRI. - Peter C. M. van Zijl; Jun Hua; Hanzhang Lu (NeuroImage, 2012)

Nuclear Overhauser enhancement (NOE) imaging in the human brain at 7 T. - Craig K. Jones; Alan J. Huang; Jiadi Xu; Richard A. E. Edden; Michael Schär; Jun Hua; Nikita Oskolkov; Domenico Zacà; Jinyuan Zhou; Michael T. McMahon; Jay J. Pillai; Peter C. M. van Zijl (NeuroImage, 2013)

Human brain atlas for automated region of interest selection in quantitative susceptibility mapping: Application to determine iron content in deep gray matter structures. - Issel Anne L. Lim; Andreia Faria; Xu Li 003; Johnny T. C. Hsu; Raag D. Airan; Susumu Mori; Peter C. M. van Zijl (NeuroImage, 2013)

In vivo high-resolution diffusion tensor imaging of the mouse brain. - Dan Wu; Jiadi Xu; Michael T. McMahon; Peter C. M. van Zijl; Susumu Mori; Frances J. Northington; Jiangyang Zhang (NeuroImage, 2013)

Three-dimensional acquisition of cerebral blood volume and flow responses during functional stimulation in a single scan. - Ying Cheng 003; Peter C. M. van Zijl; James J. Pekar; Jun Hua (NeuroImage, 2014)

Quantitative magnetic susceptibility mapping without phase unwrapping using WASSR. - Issel Anne L. Lim; Xu Li 003; Craig K. Jones; Jonathan A. D. Farrell; Deepti S. Vikram; Peter C. M. van Zijl (NeuroImage, 2014)

Localized diffusion magnetic resonance micro-imaging of the live mouse brain. - Dan Wu; Dominik Reisinger; Jiadi Xu; S. Ali Fatemi; Peter C. M. van Zijl; Susumu Mori; Jiangyang Zhang (NeuroImage, 2014)

Quantitative Susceptibility Mapping Using Structural Feature Based Collaborative Reconstruction (SFCR) in the Human Brain. - Lijun Bao; Xu Li 003; Congbo Cai; Zhong Chen 005; Peter C. M. van Zijl (IEEE Trans. Medical Imaging, 2016)

A three-dimensional single-scan approach for the measurement of changes in cerebral blood volume, blood flow, and blood oxygenation-weighted signals during functional stimulation. - Ying Cheng 003; Qin Qin; Peter C. M. van Zijl; James J. Pekar; Jun Hua (NeuroImage, 2017)

Deep Harmonization of Inconsistent MR Data for Consistent Volume Segmentation. - Blake E. Dewey; Can Zhao 001; Aaron Carass; Jiwon Oh; Peter A. Calabresi; Peter C. M. van Zijl; Jerry L. Prince (SASHIMI@MICCAI, 2018)

Simultaneous quantitative susceptibility mapping and Flutemetamol-PET suggests local correlation of iron and β-amyloid as an indicator of cognitive performance at high age. - J. M. G. van Bergen; Xu Li 003; Frances-Catherine Quevenco; A. F. Gietl; Valerie Treyer; R. Meyer; Alfred Buck; Philipp A. Kaufmann; Roger M. Nitsch; Peter C. M. van Zijl; C. Hock; P. G. Unschuld (NeuroImage, 2018)

Magnetization Transfer Contrast and Chemical Exchange Saturation Transfer MRI. Features and analysis of the field-dependent saturation spectrum. - Peter C. M. van Zijl; Wilfred W. Lam; Jiadi Xu; Linda Knutsson; Greg J. Stanisz (NeuroImage, 2018)

Protein aggregation linked to Alzheimer's disease revealed by saturation transfer MRI. - Lin Chen; Zhiliang Wei; Kannie W. Y. Chan; Shuhui Cai; Guanshu Liu; Hanzhang Lu; Philip C. Wong; Peter C. M. van Zijl; Tong Li; Jiadi Xu (NeuroImage, 2019)

Quantifying amide proton exchange rate and concentration in chemical exchange saturation transfer imaging of the human brain. - Hye-Young Heo; Zheng Han; Shanshan Jiang; Michael Schär; Peter C. M. van Zijl; Jinyuan Zhou (NeuroImage, 2019)

Multi-atlas tool for automated segmentation of brain gray matter nuclei and quantification of their magnetic susceptibility. - Xu Li 003; Lin Chen; Kwame S. Kutten; Can Ceritoglu; Yue Li; Ningdong Kang; John T. Hsu; Ye Qiao; Hongjiang Wei; Chunlei Liu 004; Michael I. Miller; Susumu Mori; et al. (NeuroImage, 2019)

Learned Proximal Networks for Quantitative Susceptibility Mapping. - Kuo-Wei Lai; Manisha Aggarwal; Peter C. M. van Zijl; Xu Li 003; Jeremias Sulam (MICCAI (2), 2020)

Monitoring diffuse injury during disease progression in experimental autoimmune encephalomyelitis with on resonance variable delay multiple pulse (onVDMP) CEST MRI. - Aline M. Thomas; Jiadi Xu; Peter A. Calabresi; Peter C. M. van Zijl; Jeff W. M. Bulte (NeuroImage, 2020)

Diffusion-regularized susceptibility tensor imaging (DRSTI) of tissue microstructures in the human brain. - Lijun Bao; Congcong Xiong; Wenping Wei; Zhong Chen 005; Peter C. M. van Zijl; Xu Li 003 (Medical Image Anal., 2021)

Early detection of Alzheimer's disease using creatine chemical exchange saturation transfer magnetic resonance imaging. - Lin Chen; Peter C. M. van Zijl; Zhiliang Wei; Hanzhang Lu; Wenzhen Duan; Philip C. Wong; Tong Li; Jiadi Xu (NeuroImage, 2021)

WaveSep: A Flexible Wavelet-Based Approach for Source Separation in Susceptibility Imaging. - Zhenghan Fang; Hyeong-Geol Shin; Peter C. M. van Zijl; Xu Li 003; Jeremias Sulam (MLCN@MICCAI, 2023)

DeepSTI: Towards tensor reconstruction using fewer orientations in susceptibility tensor imaging. - Zhenghan Fang; Kuo-Wei Lai; Peter C. M. van Zijl; Xu Li 003; Jeremias Sulam (Medical Image Anal., 2023)

Effect of motion, cortical orientation and spatial resolution on quantitative imaging of cortical R2* and magnetic susceptibility at 0.3 mm in-plane resolution at 7 T. - Peter van Gelderen; Xu Li 003; Jacco A. de Zwart; Erin S. Beck; Serhat V. Okar; Yujia Huang; KuoWei Lai; Jeremias Sulam; Peter C. M. van Zijl; Daniel S. Reich; Jeff H. Duyn; Jiaen Liu (NeuroImage, 2023)