Peipei Ping

According to our database, Peipei Ping authored at least 17 papers between 2013 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

Building an Ethical and Trustworthy Biomedical AI Ecosystem for the Translational and Clinical Integration of Foundational Models.

Simha Sankar Baradwaj, Destiny Gilliland, Jack Rincon, Henning Hermjakob, Yu Yan, Irsyad Adam, Gwyneth Lemaster, Dean Wang, Karol Watson, Alex Bui, Wei Wang, Peipei Ping

CoRR, 2024

Explainable Biomedical Hypothesis Generation via Retrieval Augmented Generation enabled Large Language Models.

Alexander Russell Pelletier, Joseph Ramirez, Irsyad Adam, Simha Sankar, Yu Yan, Ding Wang, Dylan Steinecke, Wei Wang, Peipei Ping

CoRR, 2024

CliBench: Multifaceted Evaluation of Large Language Models in Clinical Decisions on Diagnoses, Procedures, Lab Tests Orders and Prescriptions.

Mingyu Derek Ma, Chenchen Ye, Yu Yan, Xiaoxuan Wang, Peipei Ping, Timothy S. Chang, Wei Wang

CoRR, 2024

Health Day: Building Health AI Ecosystem: From Data Harmonization to Knowledge Discovery.

Jake Chen, Peipei Ping

Proceedings of the 30th ACM SIGKDD Conference on Knowledge Discovery and Data Mining, 2024

2023

Know2BIO: A Comprehensive Dual-View Benchmark for Evolving Biomedical Knowledge Graphs.

Yijia Xiao, Dylan Steinecke, Alexander Russell Pelletier, Yushi Bai, Peipei Ping, Wei Wang

CoRR, 2023

2021

Clinical Named Entity Recognition using Contextualized Token Representations.

Yichao Zhou, Chelsea Ju, J. Harry Caufield, Kevin Shih, Calvin Yu-Chian Chen, Yizhou Sun, Kai-Wei Chang, Peipei Ping, Wei Wang

CoRR, 2021

CREATe: Clinical Report Extraction and Annotation Technology.

Yichao Zhou, Wei-Ting Chen, Bowen Zhang, David Lee, J. Harry Caufield, Kai-Wei Chang, Yizhou Sun, Peipei Ping, Wei Wang

Proceedings of the 37th IEEE International Conference on Data Engineering, 2021

Clinical Temporal Relation Extraction with Probabilistic Soft Logic Regularization and Global Inference.

Yichao Zhou, Yu Yan, Rujun Han, J. Harry Caufield, Kai-Wei Chang, Yizhou Sun, Peipei Ping, Wei Wang

Proceedings of the Thirty-Fifth AAAI Conference on Artificial Intelligence, 2021

2020

EVIDENCEMINER: Textual Evidence Discovery for Life Sciences.

Xuan Wang, Yingjun Guan, Weili Liu, Aabhas Chauhan, Enyi Jiang, Qi Li, David Liem, Dibakar Sigdel, John Caufield, Peipei Ping, Jiawei Han

Proceedings of the 58th Annual Meeting of the Association for Computational Linguistics: System Demonstrations, 2020

2018

Reactome graph database: Efficient access to complex pathway data.

Antonio Fabregat, Florian Korninger, Guilherme Viteri, Konstantinos Sidiropoulos, Pablo Marín-García, Peipei Ping, Guanming Wu, Lincoln Stein, Peter D'Eustachio, Henning Hermjakob

PLoS Comput. Biol., 2018

Reactome diagram viewer: data structures and strategies to boost performance.

Antonio Fabregat, Konstantinos Sidiropoulos, Guilherme Viteri, Pablo Marín-García, Peipei Ping, Lincoln Stein, Peter D'Eustachio, Henning Hermjakob

Bioinform., 2018

2017

Developing a framework for digital objects in the Big Data to Knowledge (BD2K) commons: Report from the Commons Framework Pilots workshop.

Kathleen M. Jagodnik, Simon Koplev, Sherry L. Jenkins, Lucila Ohno-Machado, Benedict Paten, Stephan C. Schürer, Michel Dumontier, Ruben Verborgh, Alex Bui, Peipei Ping, Neil J. McKenna, Ravi K. Madduri, Ajay Pillai, Avi Ma'ayan

J. Biomed. Informatics, 2017

Aztec: A Platform to Render Biomedical Software Findable, Accessible, Interoperable, and Reusable.

Wei Wang, Brian Bleakley, Chelsea Ju, Vincent Kyi, Patrick Tan, Howard Choi, Xinxin Huang, Yichao Zhou, Justin Wood, Ding Wang, Alex Bui, Peipei Ping

CoRR, 2017

Reactome enhanced pathway visualization.

Konstantinos Sidiropoulos, Guilherme Viteri, Cristoffer Sevilla, Steven Jupe, Marissa Webber, Marija Orlic-Milacic, Bijay Jassal, Bruce May, Veronica Shamovsky, Corina Duenas, Karen Rothfels, Lisa Matthews, Heeyeon Song, Lincoln Stein, Robin Haw, Peter D'Eustachio, Peipei Ping, Henning Hermjakob, Antonio Fabregat

Bioinform., 2017

Life-iNet: A Structured Network-Based Knowledge Exploration and Analytics System for Life Sciences.

Xiang Ren, Jiaming Shen, Meng Qu, Xuan Wang, Zeqiu Wu, Qi Zhu, Meng Jiang, Fangbo Tao, Saurabh Sinha, David Liem, Peipei Ping, Richard M. Weinshilboum, Jiawei Han

Proceedings of the 55th Annual Meeting of the Association for Computational Linguistics, 2017

2015

Merging and scoring molecular interactions utilising existing community standards: tools, use-cases and a case study.

Jose M. Villaveces, Rafael C. Jiménez, Pablo Porras, Noemi del-Toro, Margaret J. Duesbury, Marine Dumousseau, Sandra E. Orchard, H. Choi, Peipei Ping, N. C. Zong, Manor Askenazi, Bianca Habermann, Henning Hermjakob

Database J. Biol. Databases Curation, 2015

2013

BioJS: an open source JavaScript framework for biological data visualization.

John Gómez, Leyla J. García, Gustavo A. Salazar, Jose M. Villaveces, Swanand P. Gore, Alexander García Castro, Maria Jesus Martin, Guillaume Launay, Rafael Alcántara, Noemi del-Toro, Marine Dumousseau, Sandra E. Orchard, Sameer Velankar, Henning Hermjakob, Chenggong Zong, Peipei Ping, Manuel Corpas, Rafael C. Jiménez

Bioinform., 2013