Paul N. Schofield

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2021

2019

DeepPVP: phenotype-based prioritization of causative variants using deep learning.

[BibT_eX]

[DOI]

BMC Bioinform., December, 2019

2018

Survey on data management in radiation protection research.

[BibT_eX]

[DOI]

Balázs G. Madas

CoRR, 2018

Ontology-based validation and identification of regulatory phenotypes.

[BibT_eX]

[DOI]

Bioinform., 2018

The anatomy of phenotype ontologies: principles, properties and applications.

[BibT_eX]

[DOI]

Rozaimi B. Mahamad Razali

Briefings Bioinform., 2018

2017

Semantic prioritization of novel causative genomic variants.

[BibT_eX]

[DOI]

Imane Boudellioua

PLoS Comput. Biol., 2017

Integrating phenotype ontologies with PhenomeNET.

[BibT_eX]

[DOI]

J. Biomed. Semant., 2017

2016

Using AberOWL for fast and scalable reasoning over BioPortal ontologies.

[BibT_eX]

[DOI]

J. Biomed. Semant., 2016

DermO; an ontology for the description of dermatologic disease.

[BibT_eX]

[DOI]

J. Biomed. Semant., 2016

To MIREOT or not to MIREOT? A Case Study of the Impact of Using MIREOT in the Experimental Factor Ontology (EFO).

[BibT_eX]

[DOI]

Proceedings of the Joint International Conference on Biological Ontology and BioCreative, 2016

Updates to the AberOWL Ontology Repository.

[BibT_eX]

[DOI]

Proceedings of the Joint International Conference on Biological Ontology and BioCreative, 2016

Large-Scale Reasoning over Functions in Biomedical Ontologies.

[BibT_eX]

[DOI]

Proceedings of the Formal Ontology in Information Systems, 2016

2015

Aber-OWL: a framework for ontology-based data access in biology.

[BibT_eX]

[DOI]

BMC Bioinform., 2015

Similarity-based search of model organism, disease and drug effect phenotypes.

[BibT_eX]

[DOI]

J. Biomed. Semant., 2015

The role of ontologies in biological and biomedical research: a functional perspective.

[BibT_eX]

[DOI]

Briefings Bioinform., 2015

Visualising Ontologies with AberOWL.

[BibT_eX]

[DOI]

Proceedings of the 8th Semantic Web Applications and Tools for Life Sciences International Conference, 2015

Experiences with Aber-OWL, an Ontology Repository with OWL EL Reasoning.

[BibT_eX]

[DOI]

Luke T. Slater

Isabelle Bailleul-Forestier

Proceedings of the Ontology Engineering, 2015

AberOWL: an ontology portal with OWL EL reasoning.

[BibT_eX]

[DOI]

Proceedings of the International Conference on Biomedical Ontology, 2015

Using Aber-OWL for fast and scalable reasoning over BioPortal ontologies.

[BibT_eX]

[DOI]

Proceedings of the International Conference on Biomedical Ontology, 2015

2014

The Human Phenotype Ontology project: linking molecular biology and disease through phenotype data.

[BibT_eX]

[DOI]

Sebastian Köhler

Sandra C. Doelken

Christopher J. Mungall

Sebastian Bauer

Helen V. Firth

Anneke T. Vulto-van Silfhout

Nucleic Acids Res., 2014

Mouse model phenotypes provide information about human drug targets.

[BibT_eX]

[DOI]

Bioinform., 2014

2013

The mouse pathology ontology, MPATH; structure and applications.

[BibT_eX]

[DOI]

J. Biomed. Semant., 2013

2012

The Units Ontology: a tool for integrating units of measurement in science.

[BibT_eX]

[DOI]

Database J. Biol. Databases Curation, 2012

Recent advances in biocuration: Meeting Report from the fifth International Biocuration Conference.

[BibT_eX]

[DOI]

Database J. Biol. Databases Curation, 2012

Linking PharmGKB to Phenotype Studies and Animal Models of Disease for Drug Repurposing.

[BibT_eX]

[DOI]

Dietrich Rebholz-Schuhmann

Anika Oellrich

Proceedings of the Biocomputing 2012: Proceedings of the Pacific Symposium, 2012

2011

Improving ontologies by automatic reasoning and evaluation of logical definitions.

[BibT_eX]

[DOI]

BMC Bioinform., 2011

Anatomy ontologies and potential users: bridging the gap.

[BibT_eX]

[DOI]

Ravensara S. Travillian

J. Biomed. Semant., 2011

A common layer of interoperability for biomedical ontologies based on OWL EL.

[BibT_eX]

[DOI]

Dietrich Rebholz-Schuhmann

Michel Dumontier

Anika Oellrich

Sarala M. Wimalaratne

Bioinform., 2011

Towards BioDBcore: a community-defined information specification for biological databases.

[BibT_eX]

[DOI]

Database J. Biol. Databases Curation, 2011

The Vertebrate Bridging Ontology (VBO).

[BibT_eX]

[DOI]

Ravensara S. Travillian

Proceedings of the 2nd International Conference on Biomedical Ontology, 2011

2010

Mouse Resource Browser - a database of mouse databases.

[BibT_eX]

[DOI]

Database J. Biol. Databases Curation, 2010

Finding and sharing: new approaches to registries of databases and services for the biomedical sciences.

[BibT_eX]

[DOI]

Database J. Biol. Databases Curation, 2010

2009

Models for financial sustainability of biological databases and resources.

[BibT_eX]

[DOI]

Database J. Biol. Databases Curation, 2009

2008

Towards a Disease Ontology.

[BibT_eX]

[DOI]

Björn Rozell

Proceedings of the Anatomy Ontologies for Bioinformatics, Principles and Practice, 2008

Solutions for data integration in functional genomics: a critical assessment and case study.

[BibT_eX]

[DOI]

Briefings Bioinform., 2008

The Mouse Resource Browser (MRB) - A near-complete registry of mouse resources.

[BibT_eX]

[DOI]

Proceedings of the 8th IEEE International Conference on Bioinformatics and Bioengineering, 2008

Towards dynamic database infrastructures for mouse genetics.

[BibT_eX]

[DOI]

Proceedings of the 8th IEEE International Conference on Bioinformatics and Bioengineering, 2008

CASIMIR: Coordination and Sustainability of International Mouse Informatics Resources.

[BibT_eX]

[DOI]

Proceedings of the 8th IEEE International Conference on Bioinformatics and Bioengineering, 2008

Digital preservation - financial sustainability of biological data and material resources.

[BibT_eX]

[DOI]

Proceedings of the 8th IEEE International Conference on Bioinformatics and Bioengineering, 2008

2007

State Complexity of Additive Weighted Finite Automata.

[BibT_eX]

[DOI]

Kai Salomaa