Paul M. K. Gordon

According to our database, Paul M. K. Gordon authored at least 18 papers between 2002 and 2021.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2021

Evaluating the effectiveness of ensemble voting in improving the accuracy of consensus signals produced by various DTWA algorithms from step-current signals generated during nanopore sequencing.

Michael R. Smith, Rachel Chan, Maaz Khurram, Paul M. K. Gordon

PLoS Comput. Biol., 2021

Oxford nanopore sequencing in clinical microbiology and infection diagnostics.

Dropen Sheka, Nikolay Alabi, Paul M. K. Gordon

Briefings Bioinform., 2021

2014

SnowyOwl: accurate prediction of fungal genes by using RNA-Seq and homology information to select among ab initio models.

Ian Reid, Nicholas O'Toole, Omar Zabaneh, Reza Nourzadeh, Mahmoud Dahdouli, Mostafa Abdellateef, Paul M. K. Gordon, Jung Soh, Gregory Butler, Christoph W. Sensen, Adrian Tsang

BMC Bioinform., 2014

2011

The 2nd DBCLS BioHackathon: interoperable bioinformatics Web services for integrated applications.

Toshiaki Katayama, Mark D. Wilkinson, Rutger A. Vos, Takeshi Kawashima, Shuichi Kawashima, Mitsuteru Nakao, Yasunori Yamamoto, Hong-Woo Chun, Atsuko Yamaguchi, Shin Kawano, Jan Aerts, Kiyoko F. Aoki-Kinoshita, Kazuharu Arakawa, Bruno Aranda, Raoul Jean Pierre Bonnal, José María Fernández, Takatomo Fujisawa, Paul M. K. Gordon, Naohisa Goto, Syed Haider, Todd W. Harris, Takashi Hatakeyama, Isaac Ho, Masumi Itoh, Arek Kasprzyk, Nobuhiro Kido, Young-Joo Kim, Akira R. Kinjo, Fumikazu Konishi, Yulia Kovarskaya, Gregory Von Kuster, Alberto Labarga, Vachiranee Limviphuvadh, E. Luke McCarthy, Yasukazu Nakamura, Yunsun Nam, Kozo Nishida, Kunihiro Nishimura, Tatsuya Nishizawa, Soichi Ogishima, Tom Oinn, Shinobu Okamoto, Shujiro Okuda, Keiichiro Ono, Kazuki Oshita, Keun-Joon Park, Nicholas H. Putnam, Martin Senger, Jessica Severin, Yasumasa Shigemoto, Hideaki Sugawara, James Taylor, Oswaldo Trelles, Chisato Yamasaki, Riu Yamashita, Noriyuki Satoh, Toshihisa Takagi

J. Biomed. Semant., 2011

2010

The DBCLS BioHackathon: standardization and interoperability for bioinformatics web services and workflows.

Toshiaki Katayama, Kazuharu Arakawa, Mitsuteru Nakao, Keiichiro Ono, Kiyoko F. Aoki-Kinoshita, Yasunori Yamamoto, Atsuko Yamaguchi, Shuichi Kawashima, Hong-Woo Chun, Jan Aerts, Bruno Aranda, Lord H. Barboza, Raoul Jean Pierre Bonnal, Richard M. Bruskiewich, Jan Christian Bryne, José María Fernández, Akira Funahashi, Paul M. K. Gordon, Naohisa Goto, Andreas Groscurth, Alex Gutteridge, Richard C. G. Holland, Yoshinobu Kano, Edward A. Kawas, Arnaud Kerhornou, Eri Kibukawa, Akira R. Kinjo, Michael Kuhn, Hilmar Lapp, Heikki Lehväslaiho, Hiroyuki Nakamura, Yasukazu Nakamura, Tatsuya Nishizawa, Chikashi Nobata, Tamotsu Noguchi, Thomas M. Oinn, Shinobu Okamoto, Stuart Owen, Evangelos Pafilis, Matthew R. Pocock, Pjotr Prins, René Ranzinger, Florian Reisinger, Lukasz Salwínski, Mark J. Schreiber, Martin Senger, Yasumasa Shigemoto, Daron M. Standley, Hideaki Sugawara, Toshiyuki Tashiro, Oswaldo Trelles, Rutger A. Vos, Mark D. Wilkinson, William S. York, Christian M. Zmasek, Kiyoshi Asai, Toshihisa Takagi

J. Biomed. Semant., 2010

Programming-by-Example Meets the Semantic Web: Using Ontologies and Web Services to Close the Semantic Gap.

Paul M. K. Gordon, Ken Barker, Christoph W. Sensen

Proceedings of the IEEE Symposium on Visual Languages and Human-Centric Computing, 2010

Helping Biologists Effectively Build Workflows, without Programming.

Paul M. K. Gordon, Ken Barker, Christoph W. Sensen

Proceedings of the Data Integration in the Life Sciences, 7th International Conference, 2010

2008

Bluejay 1.0: genome browsing and comparison with rich customization provision and dynamic resource linking.

Jung Soh, Paul M. K. Gordon, Morgan L. Taschuk, Anguo Dong, Andrew C. Ah-Seng, Andrei L. Turinsky, Christoph W. Sensen

BMC Bioinform., 2008

Creating Bioinformatics Semantic Web Services from Existing Web Services: A Real-World Application of SAWSDL.

Paul M. K. Gordon, Christoph W. Sensen

Proceedings of the 2008 IEEE International Conference on Web Services (ICWS 2008), 2008

2007

Seahawk: moving beyond HTML in Web-based bioinformatics analysis.

Paul M. K. Gordon, Christoph W. Sensen

BMC Bioinform., 2007

Semantic Web Service provision: a realistic framework for Bioinformatics programmers.

Paul M. K. Gordon, Quang Trinh, Christoph W. Sensen

Bioinform., 2007

Using a Novel Data Transformation Technique to Provide the EMBOSS Software Suite as Semantic Web Services.

Paul M. K. Gordon, Edward A. Kawas, Mark D. Wilkinson, Christoph W. Sensen

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2007

Bluejay: A Highly Scalable and Integrative Visual Environment for Genome Exploration.

Jung Soh, Paul M. K. Gordon, Andrew C. Ah-Seng, Andrei L. Turinsky, Morgan L. Taschuk, Krzysztof Borowski, Christoph W. Sensen

Proceedings of the 2007 IEEE International Conference on Services Computing, 2007

2006

Enhancing Bluejay with Scalability, Genome Comparison and Microarray Visualization.

Anguo Dong, Andrei L. Turinsky, Andrew C. Ah-Seng, Morgan L. Taschuk, Paul M. K. Gordon, Katharina Hochauer, Sabrina Fröls, Jung Soh, Christoph W. Sensen

Proceedings of the Advances in Data Analysis, 2006

Combining a High-Throughput Bioinformatics Grid and Bioinformatics Web Services.

Chunyan Wang, Paul M. K. Gordon, Andrei L. Turinsky, Jason Burgess, Terry Dalton, Christoph W. Sensen

Proceedings of the Distributed, 2006

2005

Jabiru: Harnessing Java 3D Behaviors for Device and Display Portability.

Julie N. Stromer, Gerald T. Quon, Paul M. K. Gordon, Andrei L. Turinsky, Christoph W. Sensen

IEEE Computer Graphics and Applications, 2005

2004

Bioinformatics visualization and integration with open standards: the Bluejay genomic browser.

Andrei L. Turinsky, Andrew C. Ah-Seng, Paul M. K. Gordon, Julie N. Stromer, Morgan L. Taschuk, Emily W. Xu, Christoph W. Sensen

Silico Biol., 2004

2002

Bioinformatics: Genomic Data Representation through Images - MAGPIE as an Example.

Paul M. K. Gordon, Terry Gaasterland, Christoph W. Sensen

Proceedings of the Essentials of Genomics and Bioinformatics, 2002