Patrick R. Alba

According to our database, Patrick R. Alba authored at least 21 papers between 2015 and 2024.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2024

Strategies for secondary use of real-world clinical and administrative data for outcome ascertainment in pragmatic clinical trials.

Cynthia Hau, Patricia A. Woods, Amanda S. Guski, Srihari I. Raju, Liang Zhu, Patrick R. Alba, William C. Cushman, Peter A. Glassman, Areef Ishani, Addison A. Taylor, Ryan E. Ferguson, Sarah Leatherman

J. Biomed. Informatics, 2024

2023

A deep learning approach for medication disposition and corresponding attributes extraction.

Qiwei Gan, Mengke Hu, Kelly S. Peterson, Hannah Eyre, Patrick R. Alba, Annie E. Bowles, Johnathan C. Stanley, Scott L. DuVall, Jianlin Shi

J. Biomed. Informatics, 2023

Toward Real-World Reproducibility: Verifying Value Sets for Clinical Research.

Scott L. DuVall, Craig G. Parker, Amanda R. Shields, Patrick R. Alba, Julie A. Lynch, Michael E. Matheny, Aaron W. C. Kamauu

Proceedings of the MEDINFO 2023 - The Future Is Accessible, 2023

An NLP Framework for the Extraction of Concept Measurements from Radiology and Pathology Notes.

Annie E. Bowles, Cris Perez, Anil Vachani, Jennifer Steltz, Brent Rose, Alex K. Bryant, Hannah Eyre, Scott L. DuVall, Julie A. Lynch, Patrick R. Alba

Proceedings of the MEDINFO 2023 - The Future Is Accessible, 2023

Development of a Natural Language Processing System to Identify Clinical Documentation of Electronic Cigarette Use.

Patrick R. Alba, Qiwei Gan, Mengke Hu, Shu-Hong Zhu, Scott E. Sherman, Scott L. DuVall, Mike Conway

Proceedings of the MEDINFO 2023 - The Future Is Accessible, 2023

2021

Launching into clinical space with medspaCy: a new clinical text processing toolkit in Python.

Hannah Eyre, Alec B. Chapman, Kelly S. Peterson, Jianlin Shi, Patrick R. Alba, Makoto M. Jones, Tamara L. Box, Scott L. DuVall, Olga V. Patterson

Proceedings of the AMIA 2021, American Medical Informatics Association Annual Symposium, San Diego, CA, USA, October 30, 2021, 2021

Vaping at the VA: Developing an Annotated Corpus of Electronic Cigarette Mentions in Clinical Notes at the Department of Veterans Affairs.

Mike Conway, Patrick R. Alba, Shu-Hong Zhu, Olga V. Patterson

Proceedings of the AMIA 2021, American Medical Informatics Association Annual Symposium, San Diego, CA, USA, October 30, 2021, 2021

2020

Removing barriers to clinical text processing with MedSpaCy.

Hannah Eyre, Olga V. Patterson, Jianlin Shi, Kelly S. Peterson, Alec B. Chapman, Patrick R. Alba, Scott L. DuVall

Proceedings of the AMIA 2020, 2020

A Decade of Vaping: Identifying Shifts in Clinical Documentation and Terminology in the Department of Veterans Affairs (2010-2020).

Patrick R. Alba, Olga V. Patterson, Mike Conway

Proceedings of the AMIA 2020, 2020

2019

Using Enriched Samples for Semi-Automated Vocabulary Expansion to Identify Rare Events in Clinical Text: Sexual Orientation as a Use Case.

Kristine E. Lynch, Patrick R. Alba, Benjamin Viernes, Scott L. DuVall

Proceedings of the MEDINFO 2019: Health and Wellbeing e-Networks for All, 2019

Automatic Methods to Extract Prescription Status Quality Measures from Unstructured Health Records.

Patrick R. Alba, Olga V. Patterson, Joshua S. Richman, Scott L. DuVall

Proceedings of the MEDINFO 2019: Health and Wellbeing e-Networks for All, 2019

2018

Hybrid system for adverse drug event detection.

Alec B. Chapman, Kelly S. Peterson, Patrick R. Alba, Scott L. DuVall, Olga V. Patterson

Proceedings of the 1st International Workshop on Medication and Adverse Drug Event Detection, 2018

Fast and Accurate Adverse Drug Event labeling without a GPU.

Kelly S. Peterson, Alec B. Chapman, Patrick R. Alba, Scott L. DuVall, Olga V. Patterson

Proceedings of the AMIA 2018, 2018

A User-Friendly Interface for Concept Dictionary Expansion Using Word Embeddings and SNOMED-CT.

Alec B. Chapman, Patrick R. Alba, Brian T. Bucher, Scott L. DuVall, Olga V. Patterson

Proceedings of the AMIA 2018, 2018

Ankle Brachial Index Extraction System.

Patrick R. Alba, Scott L. DuVall, Daniel Norvell, Kathryn P. Moore, Joseph M. Czerniecki, Olga V. Patterson

Proceedings of the AMIA 2018, 2018

2017

Pathology Information Extraction in Bladder Cancer Surveillance.

Patrick R. Alba, Scott L. DuVall, Terri Elizabeth Workman, Florian Schroeck, Olga V. Patterson

Proceedings of the AMIA 2017, 2017

2016

An Introduction to Natural Language Processing Methods in Clinical Research.

Olga V. Patterson, Patrick R. Alba, Scott L. DuVall

Proceedings of the AMIA 2016, 2016

Large Scale Clinical Text Processing and Process Optimization.

Scott L. DuVall, Patrick R. Alba, Olga V. Patterson

Proceedings of the AMIA 2016, 2016

The Super Annotator: A Method of Semi-Automated Rare Event Identification for Large Clinical Data Sets.

Patrick R. Alba, Olga V. Patterson, Benjamin Viernes, Daniel W. Denhalter, Nicole Bailey, Andrew Wilson, Aaron W. C. Kamauu, Scott L. DuVall

Proceedings of the AMIA 2016, 2016

2015

Extraction of Vital Signs from Clinical Notes.

Olga V. Patterson, Makoto Jones, Yiwen Yao, Benjamin Viernes, Patrick R. Alba, Theodore J. Iwashyna, Scott L. DuVall

Proceedings of the MEDINFO 2015: eHealth-enabled Health, 2015

Knowledge Base Acquisition For Rare Concepts Using Manual Bootstrapping.

Patrick R. Alba, Scott L. DuVall, Joanne LaFleur, Adam Bress, Olga V. Patterson

Proceedings of the AMIA 2015, 2015