Pascal Barbry

According to our database, Pascal Barbry authored at least 17 papers between 2005 and 2024.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2024

Detecting subtle transcriptomic perturbations induced by lncRNAs knock-down in single-cell CRISPRi screening using a new sparse supervised autoencoder neural network.

Marin Truchi, Caroline Lacoux, Cyprien Gille, Julien Fassy, Virginie Magnone, Rafael Lopes Goncalves, Cédric Girard Riboulleau, Iris Manosalva-Pena, Marine Gautier-Isola, Kevin Lebrigand, Pascal Barbry, Salvatore Spicuglia, Georges Vassaux, Roger Rezzonico, Michel Barlaud, Bernard Mari

Frontiers Bioinform., 2024

CMOSS: A Reliable, Motif-based Columnar Molecular Storage System.

Eugenio Marinelli, Yiqing Yan, Virginie Magnone, Pascal Barbry, Raja Appuswamy

CoRR, 2024

2023

Towards Migration-Free Just-In-Case Data Archival for Future Cloud Data Lakes.

Eugenio Marinelli, Yiqing Yan, Virginie Magnone, Charlotte Dumargne, Pascal Barbry, Thomas Heinis, Raja Appuswamy

Proc. VLDB Endow., 2023

Using Soft Information to Improve Error Tolerance of Motif-Based DNA Storage Systems.

Eugenio Marinelli, Virginie Magnone, Marie-Charlotte Dumargne, Pascal Barbry, Raja Appuswamy

Proceedings of the 24th International Conference on Digital Signal Processing, 2023

2022

Efficient Clustering Using Alternating Minimization And A Projection-Gradient Method For Dimension Reduction.

Cyprien Gilet, Marie Deprez, Pascal Barbry, Jean-Baptiste Caillau, Michel Barlaud

Proceedings of the 2022 IEEE International Conference on Image Processing, 2022

2021

Image storage onto synthetic DNA.

Melpomeni Dimopoulou, Marc Antonini, Pascal Barbry, Raja Appuswamy

Signal Process. Image Commun., 2021

Decoding Of Nanopore-Sequenced Synthetic DNA Storing Digital Images.

Eva Gil San Antonio, Melpomeni Dimopoulou, Marc Antonini, Pascal Barbry, Raja Appuswamy

Proceedings of the 2021 IEEE International Conference on Image Processing, 2021

2020

Storing Digital Data Into DNA: A Comparative Study Of Quaternary Code Construction.

Melpomeni Dimopoulou, Marc Antonini, Pascal Barbry, Raja Appuswamy

Proceedings of the 2020 IEEE International Conference on Acoustics, 2020

2019

A biologically constrained encoding solution for long-term storage of images onto synthetic DNA.

Melpomeni Dimopoulou, Marc Antonini, Pascal Barbry, Raja Appuswamy

Proceedings of the 27th European Signal Processing Conference, 2019

OligoArchive: Using DNA in the DBMS storage hierarchy.

Raja Appuswamy, Kevin Le Brigand, Pascal Barbry, Marc Antonini, Olivier Madderson, Paul S. Freemont, James McDonald, Thomas Heinis

Proceedings of the 9th Biennial Conference on Innovative Data Systems Research, 2019

2016

RiboProfiling: a Bioconductor package for standard Ribo-seq pipeline processing.

Alexandra Popa, Kevin Le Brigand, Agnes Paquet, Nicolas Nottet, Karine Robbe-Sermesant, Rainer Waldmann, Pascal Barbry

F1000Research, 2016

2010

MiRonTop: mining microRNAs targets across large scale gene expression studies.

Kevin Le Brigand, Karine Robbe-Sermesant, Bernard Mari, Pascal Barbry

Bioinform., 2010

2007

An Ontology-based Approach to Support Text Mining and Information Retrieval in the Biological Domain.

Khaled Khelif, Rose Dieng-Kuntz, Pascal Barbry

J. Univers. Comput. Sci., 2007

Mediante: a web-based microarray data manager.

Kevin Le Brigand, Pascal Barbry

Bioinform., 2007

2006

Web sémantique pour la mémoire d'expériences d'une communauté scientifique : le projet MEAT.

Khaled Khelif, Rose Dieng-Kuntz, Pascal Barbry

Proceedings of the Extraction et gestion des connaissances (EGC'2006), 2006

2005

Semantic Web Technologies for Interpreting DNA Microarray Analyses: The MEAT System.

Khaled Khelif, Rose Dieng-Kuntz, Pascal Barbry

Proceedings of the Web Information Systems Engineering, 2005

MEAT: an experiment memory for interpreting DNA microarray analyses.

Khaled Khelif, Rose Dieng-Kuntz, Pascal Barbry

Proceedings of the 3rd International Conference on Knowledge Capture (K-CAP 2005), 2005