Padraig Gleeson

Orcid: 0000-0001-5963-8576

According to our database1, Padraig Gleeson authored at least 28 papers between 2007 and 2024.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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Online presence:

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Bibliography

2024
Specifications of standards in systems and synthetic biology: status, developments, and tools in 2024.
J. Integr. Bioinform., 2024

2023
NeuroML-DB: Sharing and characterizing data-driven neuroscience models described in NeuroML.
PLoS Comput. Biol., March, 2023

Specifications of standards in systems and synthetic biology: status and developments in 2022 and the COMBINE meeting 2022.
J. Integr. Bioinform., March, 2023

2022
BioSimulators: a central registry of simulation engines and services for recommending specific tools.
Nucleic Acids Res., 2022

Editorial: Neuroinformatics of large-scale brain modelling.
Frontiers Neuroinformatics, 2022

BioSimulators: a central registry of simulation engines and services for recommending specific tools.
CoRR, 2022

2021
Specifications of standards in systems and synthetic biology: status and developments in 2021.
J. Integr. Bioinform., 2021

2020
The SONATA data format for efficient description of large-scale network models.
PLoS Comput. Biol., 2020

The first 10 years of the international coordination network for standards in systems and synthetic biology (COMBINE).
J. Integr. Bioinform., 2020

2019
Specifications of Standards in Systems and Synthetic Biology: Status and Developments in 2019.
J. Integr. Bioinform., 2019

Harmonizing semantic annotations for computational models in biology.
Briefings Bioinform., 2019

2018
Specifications of Standards in Systems and Synthetic Biology: Status and Developments in 2017.
J. Integr. Bioinform., 2018

Code Generation in Computational Neuroscience: A Review of Tools and Techniques.
Frontiers Neuroinformatics, 2018

2017
A brief history of COMBINE.
Proceedings of the 2017 Winter Simulation Conference, 2017

2016
Specifications of Standards in Systems and Synthetic Biology: Status and Developments in 2016.
J. Integr. Bioinform., 2016

2014
Open Source Brain.
Proceedings of the Encyclopedia of Computational Neuroscience, 2014

neuroConstruct.
Proceedings of the Encyclopedia of Computational Neuroscience, 2014

Synthetic Neuronal Circuits/Networks.
Proceedings of the Encyclopedia of Computational Neuroscience, 2014

Software Tools for Modelling in Computational Neuroscience: Overview.
Proceedings of the Encyclopedia of Computational Neuroscience, 2014

NeuroML.
Proceedings of the Encyclopedia of Computational Neuroscience, 2014

Glutamate-Bound NMDARs Arising from <i>In Vivo</i>-like Network Activity Extend Spatio-temporal Integration in a L5 Cortical Pyramidal Cell Model.
PLoS Comput. Biol., 2014

libNeuroML and PyLEMS: using Python to combine procedural and declarative modeling approaches in computational neuroscience.
Frontiers Neuroinformatics, 2014

LEMS: a language for expressing complex biological models in concise and hierarchical form and its use in underpinning NeuroML 2.
Frontiers Neuroinformatics, 2014

OpenWorm: an open-science approach to modeling Caenorhabditis elegans.
Frontiers Comput. Neurosci., 2014

2010
NeuroML: A Language for Describing Data Driven Models of Neurons and Networks with a High Degree of Biological Detail.
PLoS Comput. Biol., 2010

2008
Computational Intelligence in Electrophysiology: Trends and Open Problems.
Proceedings of the Applications of Computational Intelligence in Biology: Current Trends and Open Problems, 2008

2007
MorphML: Level 1 of the NeuroML Standards for Neuronal Morphology Data and Model Specification.
Neuroinformatics, 2007

Interoperability of Neuroscience Modeling Software: Current Status and Future Directions.
Neuroinformatics, 2007


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