Pablo Chacón

According to our database, Pablo Chacón authored at least 24 papers between 1995 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2023

Predicting protein stability changes upon mutation using a simple orientational potential.

Iván Martín Hernández, Yves Dehouck, Ugo Bastolla, José Ramón López-Blanco, Pablo Chacón

Bioinform., January, 2023

2022

Local Normal Mode Analysis for Fast Loop Conformational Sampling.

José Ramón López-Blanco, Yves Dehouck, Ugo Bastolla, Pablo Chacón

J. Chem. Inf. Model., 2022

Proposed Practical Overheight Detection and Alert System.

A. M. Aly, Pablo Chacón, H. Gol-Zaroudi, Jin-Woo Choi, George Z. Voyiadjis

Autom. Control. Comput. Sci., 2022

Using a Graph Transformer Network to Predict 3D Coordinates of Proteins via Geometric Algebra Modelling.

Alberto Pepe, Joan Lasenby, Pablo Chacón

Proceedings of the Empowering Novel Geometric Algebra for Graphics and Engineering, 2022

2021

InterEvDock3: a combined template-based and free docking server with increased performance through explicit modeling of complex homologs and integration of covariation-based contact maps.

Chloé Quignot, Guillaume Postic, Hélène Bret, Julien Rey, Pierre Granger, Samuel Murail, Pablo Chacón, Jessica Andreani, Pierre Tufféry, Raphaël Guérois

Nucleic Acids Res., 2021

Atomic-level evolutionary information improves protein-protein interface scoring.

Chloé Quignot, Pierre Granger, Pablo Chacón, Raphaël Guérois, Jessica Andreani

Bioinform., 2021

KORP-PL: a coarse-grained knowledge-based scoring function for protein-ligand interactions.

Maria Kadukova, Karina dos Santos Machado, Pablo Chacón, Sergei Grudinin

Bioinform., 2021

2019

KORP: knowledge-based 6D potential for fast protein and loop modeling.

José Ramón López-Blanco, Pablo Chacón

Bioinform., 2019

2016

RCD+: Fast loop modeling server.

José Ramón López-Blanco, Alejandro Jesús Canosa-Valls, Yaohang Li, Pablo Chacón

Nucleic Acids Res., 2016

A fast band-Krylov eigensolver for macromolecular functional motion simulation on multicore architectures and graphics processors.

José Ignacio Aliaga, Pedro Alonso, José M. Badía, Pablo Chacón, Davor Davidovic, José Ramón López-Blanco, Enrique S. Quintana-Ortí

J. Comput. Phys., 2016

FRODOCK 2.0: fast protein-protein docking server.

Erney Ramírez-Aportela, José Ramón López-Blanco, Pablo Chacón

Bioinform., 2016

2014

iMODS: internal coordinates normal mode analysis server.

José Ramón López-Blanco, José Ignacio Aliaga, Enrique S. Quintana-Ortí, Pablo Chacón

Nucleic Acids Res., 2014

FRODRUG: A Virtual Screening GPU Accelerated Approach for Drug Discovery.

Santiago Garcia Sanchez, Erney Ramírez-Aportela, José Ignacio Garzón, Pablo Chacón, Antonio S. Montemayor, Raúl Cabido

Proceedings of the 22nd Euromicro International Conference on Parallel, 2014

2013

Exploring large macromolecular functional motions on clusters of multicore processors.

José Ramón López-Blanco, Ruymán Reyes, José Ignacio Aliaga, Rosa M. Badia, Pablo Chacón, Enrique S. Quintana-Ortí

J. Comput. Phys., 2013

2012

Spinor product computations for protein conformations.

Pieter Chys, Pablo Chacón

J. Comput. Chem., 2012

2011

iMod: multipurpose normal mode analysis in internal coordinates.

José Ramón López-Blanco, José Ignacio Garzón, Pablo Chacón

Bioinform., 2011

2010

End-To-End Cache System for Grid Computing: Design and Efficiency Analysis of a High-Throughput Bioinformatic Docking Application.

José Ignacio Garzón, Eduardo Huedo, Rubén Santiago Montero, Ignacio Martín Llorente, Pablo Chacón

Int. J. High Perform. Comput. Appl., 2010

2009

FRODOCK: a new approach for fast rotational protein-protein docking.

José Ignacio Garzón, José Ramón López-Blanco, Carles Pons, Julio A. Kovacs, Ruben Abagyan, Juan Fernández-Recio, Pablo Chacón

Bioinform., 2009

2007

Adaptation of a Multi-Resolution Docking Bioinformatics Application to the Grid.

José Ignacio Garzón, Eduardo Huedo, Rubén S. Montero, Ignacio Martín Llorente, Pablo Chacón

J. Softw., 2007

DFprot: a webtool for predicting local chain deformability.

José Ignacio Garzón, Julio A. Kovacs, Ruben Abagyan, Pablo Chacón

Bioinform., 2007

ADP_EM: fast exhaustive multi-resolution docking for high-throughput coverage.

José Ignacio Garzón, Julio A. Kovacs, Ruben Abagyan, Pablo Chacón

Bioinform., 2007

Grid Multi-Resolution Docking.

José Ignacio Garzón, Eduardo Huedo, Rubén S. Montero, Ignacio Martín Llorente, Pablo Chacón

Proceedings of the 15th Euromicro International Conference on Parallel, 2007

2004

Topology representing neural networks reconcile biomolecular shape, structure, and dynamics.

Willy Wriggers, Pablo Chacón, Julio A. Kovacs, Florence Tama, Stefan Birmanns

Neurocomputing, 2004

1995

Compartimentation in Replicator Models.

Juan Carlos Nuño, Pablo Chacón, Alvaro Moreno, Federico Morán

Proceedings of the Advances in Artificial Life, 1995