Oxana V. Galzitskaya

According to our database, Oxana V. Galzitskaya authored at least 26 papers between 2003 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

Variation in base composition, structure-function relationships, and origins of structural repetition in bacterial rpsA gene.

Andrey V. Machulin, Evgeniya I. Deryusheva, Oxana V. Galzitskaya

Biosyst., 2024

Is there a bias in the codon frequency corresponding to homo-repeats found in human proteins?

Nikita V. Dovidchenko, Michail Yu. Lobanov, Oxana V. Galzitskaya

Biosyst., 2024

2023

CAID prediction portal: a comprehensive service for predicting intrinsic disorder and binding regions in proteins.

Alessio Del Conte, Adel Bouhraoua, Mahta Mehdiabadi, Damiano Clementel, Alexander Miguel Monzon, Alex S. Holehouse, Daniel A. Griffith, Ryan J. Emenecker, Ashwini Patil, Ronesh Sharma, Tatsuhiko Tsunoda, Alok Sharma, Yi Jun Tang, Bin Liu, Claudio Mirabello, Björn Wallner, Burkhard Rost, Dagmar Ilzhöfer, Maria Littmann, Michael Heinzinger, Lea I M. Krautheimer, Michael Bernhofer, Liam J. McGuffin, Isabelle Callebaut, Tristan Bitard Feildel, Jian Liu, Jianlin Cheng, Zhiye Guo, Jinbo Xu, Sheng Wang, Nawar Malhis, Jörg Gsponer, Chol-Song Kim, Kun-Sop Han, Myong-Chol Ma, Lukasz A. Kurgan, Sina Ghadermarzi, Akila Katuwawala, Bi Zhao, Zhenling Peng, Zhonghua Wu, Gang Hu, Kui Wang, Md. Tamjidul Hoque, Md Wasi Ul Kabir, Michele Vendruscolo, Pietro Sormanni, Min Li, Fuhao Zhang, Pengzhen Jia, Yida Wang, Michail Yu. Lobanov, Oxana V. Galzitskaya, Wim F. Vranken, Adrián Díaz, Thomas Litfin, Yaoqi Zhou, Jack Hanson, Kuldip K. Paliwal, Zsuzsanna Dosztányi, Gábor Erdös, Silvio C. E. Tosatto, Damiano Piovesan

Nucleic Acids Res., July, 2023

2019

Is there codon usage bias for poly-Q stretches in the human proteome?

Oxana V. Galzitskaya, Georgii S. Novikov, Nikita V. Dovidchenko, Michail Yu. Lobanov

J. Bioinform. Comput. Biol., 2019

2016

Search for conserved amino acid residues of the α-crystallin proteins of vertebrates.

Nikita G. Shiliaev, Olga M. Selivanova, Oxana V. Galzitskaya

J. Bioinform. Comput. Biol., 2016

2015

Theoretical Search for RNA Folding Nuclei.

Leonid B. Pereyaslavets, Oxana V. Galzitskaya

Entropy, 2015

FoldNucleus: web server for the prediction of RNA and protein folding nuclei from their 3D structures.

Leonid B. Pereyaslavets, Igor V. Sokolovskiy, Oxana V. Galzitskaya

Bioinform., 2015

What handedness and angles between helices has the studied three-helical protein domain?

Leonid B. Pereyaslavets, Anna V. Glyakina, Nikita V. Dovidchenko, Igor V. Sokolovskiy, Oxana V. Galzitskaya

Bioinform., 2015

2014

HRaP: database of occurrence of HomoRepeats and patterns in proteomes.

Michail Yu. Lobanov, Igor V. Sokolovskiy, Oxana V. Galzitskaya

Nucleic Acids Res., 2014

2013

A novel web server predicts amino acid residue protection against hydrogen-deuterium exchange.

Michail Yu. Lobanov, Masha Yu. Suvorina, Nikita V. Dovidchenko, Igor V. Sokolovskiy, Alexey K. Surin, Oxana V. Galzitskaya

Bioinform., 2013

2010

Library of Disordered Patterns in 3D Protein Structures.

Michail Yu. Lobanov, Eugenia Furletova, Natalya S. Bogatyreva, Mikhail A. Roytberg, Oxana V. Galzitskaya

PLoS Comput. Biol., 2010

ComSin: database of protein structures in bound (complex) and unbound (single) states in relation to their intrinsic disorder.

Michail Yu. Lobanov, Benjamin A. Shoemaker, Sergiy O. Garbuzynskiy, Jessica H. Fong, Anna R. Panchenko, Oxana V. Galzitskaya

Nucleic Acids Res., 2010

Flexibility and Mobility in Mesophilic and Thermophilic homologous proteins from Molecular Dynamics and Foldunfold Method.

Tatyana B. Mamonova, Anna V. Glyakina, Maria G. Kurnikova, Oxana V. Galzitskaya

J. Bioinform. Comput. Biol., 2010

A Comparative Analysis of Folding Pathways of Thermophilic and Mesophilic proteins by Monte Carlo Simulations.

Anna V. Glyakina, Oxana V. Galzitskaya

J. Bioinform. Comput. Biol., 2010

Influence of Conformational Entropy on the Protein Folding Rate.

Oxana V. Galzitskaya

Entropy, 2010

FoldAmyloid: a method of prediction of amyloidogenic regions from protein sequence.

Sergiy O. Garbuzynskiy, Michail Yu. Lobanov, Oxana V. Galzitskaya

Bioinform., 2010

2009

Intrinsic Disorder in Protein Interactions: Insights From a Comprehensive Structural Analysis.

Jessica H. Fong, Benjamin A. Shoemaker, Sergiy O. Garbuzynskiy, Michail Yu. Lobanov, Oxana V. Galzitskaya, Anna R. Panchenko

PLoS Comput. Biol., 2009

2008

Compactness Determines protein Folding Type.

Oxana V. Galzitskaya, Natalya S. Bogatyreva, Dmitry N. Ivankov

J. Bioinform. Comput. Biol., 2008

Search for Folding Initiation Sites from amino acid Sequence.

Oxana V. Galzitskaya

J. Bioinform. Comput. Biol., 2008

Prediction of Loop Regions in protein Sequence.

Nikita V. Dovidchenko, Natalya S. Bogatyreva, Oxana V. Galzitskaya

J. Bioinform. Comput. Biol., 2008

2007

Different packing of external residues can explain differences in the thermostability of proteins from thermophilic and mesophilic organisms.

Anna V. Glyakina, Sergiy O. Garbuzynskiy, Michail Yu. Lobanov, Oxana V. Galzitskaya

Bioinform., 2007

2006

Prediction of Amyloidogenic and Disordered Regions in Protein Chains.

Oxana V. Galzitskaya, Sergiy O. Garbuzynskiy, Michail Yu. Lobanov

PLoS Comput. Biol., 2006

Is It Possible to Predict Amyloidogenic Regions from Sequence Alone?

Oxana V. Galzitskaya, Sergiy O. Garbuzynskiy, Michail Yu. Lobanov

J. Bioinform. Comput. Biol., 2006

Trend of Amino Acid Composition of Proteins of Different Taxa.

Natalya S. Bogatyreva, Alexei V. Finkelstein, Oxana V. Galzitskaya

J. Bioinform. Comput. Biol., 2006

FoldUnfold: web server for the prediction of disordered regions in protein chain.

Oxana V. Galzitskaya, Sergiy O. Garbuzynskiy, Michail Yu. Lobanov

Bioinform., 2006

2003

beta-Hairpins, alpha-helices, and the intermediates among the secondary structures in the energy landscape of a peptide from a distal beta-hairpin of SH3 domain.

Kazuyoshi Ikeda, Oxana V. Galzitskaya, Haruki Nakamura, Junichi Higo

J. Comput. Chem., 2003