Osamu Miyashita

According to our database, Osamu Miyashita authored at least 13 papers between 1997 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2024

ResiDEM: Analytical Tool for Isomorphous Difference Electron Density Maps Utilizing Dynamic Residue Identification via Density Clustering.

Sriram Srinivasa Raghavan, Osamu Miyashita

J. Chem. Inf. Model., 2024

Xphase3d: Memory-Distributed Phase Retrieval for Reconstructing Large-Scale 3D Density Maps of Biological Macromolecules.

Wenyang Zhao, Osamu Miyashita, Miki Nakano, Florence Tama

Proceedings of the IEEE International Conference on Cluster Computing, 2024

2023

Composable Workflow for Accelerating Neural Architecture Search Using In Situ Analytics for Protein Classification.

Georgia Channing, Ria Patel, Paula Olaya, Ariel Keller Rorabaugh, Osamu Miyashita, Silvina Caíno-Lores, Catherine D. Schuman, Florence Tama, Michela Taufer

Proceedings of the 52nd International Conference on Parallel Processing, 2023

2022

A Methodology to Generate Efficient Neural Networks for Classification of Scientific Datasets.

Ria Patel, Ariel Keller Rorabaugh, Paula Olaya, Silvina Caíno-Lores, Georgia Channing, Catherine D. Schuman, Osamu Miyashita, Florence Tama, Michela Taufer

Proceedings of the 18th IEEE International Conference on e-Science, 2022

Identifying Structural Properties of Proteins from X-ray Free Electron Laser Diffraction Patterns.

Paula Olaya, Silvina Caíno-Lores, Vanessa Lama, Ria Patel, Ariel Keller Rorabaugh, Osamu Miyashita, Florence Tama, Michela Taufer

Proceedings of the 18th IEEE International Conference on e-Science, 2022

2021

Protocol for Retrieving Three-Dimensional Biological Shapes for a Few XFEL Single-Particle Diffraction Patterns.

Sandhya P. Tiwari, Florence Tama, Osamu Miyashita

J. Chem. Inf. Model., 2021

2020

Computational Protocol for Assessing the Optimal Pixel Size to Improve the Accuracy of Single-particle Cryo-electron Microscopy Maps.

Sandhya P. Tiwari, Sahil Chhabra, Florence Tama, Osamu Miyashita

J. Chem. Inf. Model., 2020

2018

Poisson image denoising by piecewise principal component analysis and its application in single-particle X-ray diffraction imaging.

Qiyu Jin, Osamu Miyashita, Florence Tama, Jie Yang, Slavica Jonic

IET Image Process., 2018

Searching for 3D structural models from a library of biological shapes using a few 2D experimental images.

Sandhya P. Tiwari, Florence Tama, Osamu Miyashita

BMC Bioinform., 2018

2017

Flexible fitting to cryo-EM density map using ensemble molecular dynamics simulations.

Osamu Miyashita, Chigusa Kobayashi, Takaharu Mori, Yuji Sugita, Florence Tama

J. Comput. Chem., 2017

2011

Crystal molecular dynamics simulations to speed up MM/PB(GB)SA evaluation of binding free energies of di-mannose deoxy analogs with P51G-m4-Cyanovirin-N.

Ivan I. Vorontsov, Osamu Miyashita

J. Comput. Chem., 2011

A wearable ECG-HR detector and its application to automatic assist-mode selection of an electrically assisted bicycle.

Akinori Ueno, Osamu Miyashita, Toshiya Yoshida, Junichi Yamamoto, Philippe Lataire

Proceedings of the 33rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2011

1997

A predictive instantaneous-current PWM controlled rectifier with AC-side harmonic current reduction.

Yasuyuki Nishida, Osamu Miyashita, Toshimasa Haneyoshi, Hideo Tomita, Akeshi Maeda

IEEE Trans. Ind. Electron., 1997