Orkun S. Soyer

According to our database, Orkun S. Soyer authored at least 12 papers between 2002 and 2018.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2018

MetQy - an R package to query metabolic functions of genes and genomes.

Andrea S. Martinez-Vernon, Frederick Farrell, Orkun S. Soyer

Bioinform., 2018

2016

Enzyme Sequestration as a Tuning Point in Controlling Response Dynamics of Signalling Networks.

Song Feng, Julien F. Ollivier, Orkun S. Soyer

PLoS Comput. Biol., 2016

2014

Phosphate Sink Containing Two-Component Signaling Systems as Tunable Threshold Devices.

Munia Amin, Varun B. Kothamachu, Elisenda Feliu, Birgit E. Scharf, Steven L. Porter, Orkun S. Soyer

PLoS Comput. Biol., 2014

2013

Phosphorelays Provide Tunable Signal Processing Capabilities for the Cell.

Varun B. Kothamachu, Elisenda Feliu, Carsten Wiuf, Luca Cardelli, Orkun S. Soyer

PLoS Comput. Biol., 2013

Split Histidine Kinases Enable Ultrasensitivity and Bistability in Two-Component Signaling Networks.

Munia Amin, Steven L. Porter, Orkun S. Soyer

PLoS Comput. Biol., 2013

2012

On the role of ultrasensitivity in biomolecular control systems.

Francesco Montefusco, Arno Steinacher, Ozgur E. Akman, Declan G. Bates, Orkun S. Soyer

Proceedings of the 51th IEEE Conference on Decision and Control, 2012

2010

Evolution under Fluctuating Environments Explains Observed Robustness in Metabolic Networks.

Orkun S. Soyer, Thomas Pfeiffer

PLoS Comput. Biol., 2010

2008

Evolving BlenX programs to simulate the evolution of biological networks.

Lorenzo Dematté, Corrado Priami, Alessandro Romanel, Orkun S. Soyer

Theor. Comput. Sci., 2008

Evolution of Taxis Responses in Virtual Bacteria: Non-Adaptive Dynamics.

Richard A. Goldstein, Orkun S. Soyer

PLoS Comput. Biol., 2008

In silico evolution of chemotaxis.

Richard A. Goldstein, Orkun S. Soyer

Proceedings of the Eleventh International Conference on the Synthesis and Simulation of Living Systems, 2008

2007

A Formal and Integrated Framework to Simulate Evolution of Biological Pathways.

Lorenzo Dematté, Corrado Priami, Alessandro Romanel, Orkun S. Soyer

Proceedings of the Computational Methods in Systems Biology, International Conference, 2007

2002

Using Evolutionary Methods to Study G-Protein Coupled Receptors.

Orkun S. Soyer, Matthew W. Dimmic, Richard R. Neubig, Richard A. Goldstein

Proceedings of the 7th Pacific Symposium on Biocomputing, 2002