Nurit Haspel

Orcid: 0000-0003-4810-379X

According to our database1, Nurit Haspel authored at least 39 papers between 2006 and 2024.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

Legend:

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In proceedings 
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PhD thesis 
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Links

On csauthors.net:

Bibliography

2024
Allosteric Activation of RhoA Complexed with p115-RhoGEF Deciphered by Conformational Dynamics.
J. Chem. Inf. Model., 2024

Elucidating Cancer Subtypes by Using Epigenome and Genome Cross-Talk.
Proceedings of the Bioinformatics and Biomedical Engineering, 2024

2023
Investigating the Role of Gene Body Methylation and CpG Methylation in Cancer Subtyping.
Proceedings of the 2023 10th International Conference on Bioinformatics Research and Applications, 2023

2021
Assessing the Effects of Amino Acid Insertion and Deletion Mutations.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2021

2020
Patch-DCA: improved protein interface prediction by utilizing structural information and clustering DCA scores.
Bioinform., 2020

2019
Integrating Co-Evolutionary Information in Monte Carlo Based Method for Proteins Trajectory Simulation.
Proceedings of the 10th ACM International Conference on Bioinformatics, 2019

2017
Preface: Selected Articles from 2015 Computational Structural Bioinformatics Workshop.
J. Comput. Biol., 2017

Machine Learning Approaches for Predicting Protein Complex Similarity.
J. Comput. Biol., 2017

Introduction to selected papers from the 8th International Conference on Bioinformatics and Computational Biology (BICOB 2016).
J. Bioinform. Comput. Biol., 2017

Detecting intermediate protein conformations using algebraic topology.
BMC Bioinform., 2017

Detecting chromosomal structural variation using jaccard distance and parallel architecture.
Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017

The 2017 Computational Structural Bioinformatics Workshop: CSBW 2017.
Proceedings of the 8th ACM International Conference on Bioinformatics, 2017

Predicting the Effect of Point Mutations on Protein Structural Stability.
Proceedings of the 8th ACM International Conference on Bioinformatics, 2017

Ranking Protein-Protein Binding Using Evolutionary Information and Machine Learning.
Proceedings of the 8th ACM International Conference on Bioinformatics, 2017

2016
Introduction to the selected papers from the 7th International Conference on Bioinformatics and Computational Biology (BICoB 2015).
J. Bioinform. Comput. Biol., 2016

Accurate refinement of docked protein complexes using evolutionary information and deep learning.
J. Bioinform. Comput. Biol., 2016

Assessing how multiple mutations affect protein stability using rigid cluster size distributions.
Proceedings of the 6th IEEE International Conference on Computational Advances in Bio and Medical Sciences, 2016

2015
The 7th Computational Structural Bioinformatics Workshop.
J. Comput. Biol., 2015

Accurate Prediction of Docked Protein Structure Similarity.
J. Comput. Biol., 2015

A new DP algorithm for comparing gene expression data using geometric similarity.
Proceedings of the 2015 IEEE International Conference on Bioinformatics and Biomedicine, 2015

Accurate prediction of docked protein structure similarity using neural networks and restricted Boltzmann machines.
Proceedings of the 2015 IEEE International Conference on Bioinformatics and Biomedicine, 2015

2014
TIDE: Inter-chromosomal translocation and insertion detection using embeddings.
Proceedings of the 2014 IEEE International Conference on Big Data (IEEE BigData 2014), 2014

AccuRMSD: a machine learning approach to predicting structure similarity of docked protein complexes.
Proceedings of the 5th ACM Conference on Bioinformatics, 2014

2013
Multi-Resolution Rigidity-Based Sampling of Protein Conformational Paths.
Proceedings of the ACM Conference on Bioinformatics, 2013

An Evolutionary Conservation & Rigidity Analysis Machine Learning Approach for Detecting Critical Protein Residues.
Proceedings of the ACM Conference on Bioinformatics, 2013

2012
Guiding protein docking with Geometric and Evolutionary Information.
J. Bioinform. Comput. Biol., 2012

An Evolutionary conservation-Based Method for Refining and Reranking protein Complex Structures.
J. Bioinform. Comput. Biol., 2012

Characterizing Intermediate Conformations in Protein Conformational Space.
Proceedings of the Computational Intelligence Methods for Bioinformatics and Biostatistics, 2012

Combining conservation and rigidity methods to detect critical residues in proteins.
Proceedings of the 2012 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2012

Towards a hybrid method for detecting critical protein residues.
Proceedings of the 2012 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2012

An evolutionary-guided iterative refinement approach for protein multimers.
Proceedings of the 2012 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2012

Refining multimeric protein complexes using conservation, electrostatics and probabilistic selection.
Proceedings of the 2012 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2012

2011
The 5th International Conference on Bio-Inspired Models of Network, Information and Computing Systems (Bionetics 2010) Special Track on Bioinformatics.
J. Bioinform. Comput. Biol., 2011

Protein docking with information on evolutionary conserved interfaces.
Proceedings of the 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2011

Refinement of docked protein complex structures using evolutionary traces.
Proceedings of the 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2011

2010
Tracing Conformational Changes in Proteins Represented at a Coarse Level.
Proceedings of the Bio-Inspired Models of Network, Information, and Computing Systems, 2010

2009
Protein Segments with Conformationally Restricted Amino Acids Can Control Supramolecular Organization at the Nanoscale.
J. Chem. Inf. Model., 2009

2006
Computational modeling and prediction of self assembling [beta]-sheet rich protein structures
PhD thesis, 2006

A permissive secondary structure-guided superposition tool for clustering of protein fragments toward protein structure prediction via fragment assembly.
Bioinform., 2006


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