Noël Malod-Dognin

According to our database, Noël Malod-Dognin authored at least 27 papers between 2008 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

Simplifying complex machine learning by linearly separable network embedding spaces.

Alexandros Xenos, Noël Malod-Dognin, Natasa Przulj

CoRR, 2024

Graphlets correct for the topological information missed by random walks.

Sam F. L. Windels, Noël Malod-Dognin, Natasa Przulj

CoRR, 2024

Simplicity within biological complexity.

Natasa Przulj, Noël Malod-Dognin

CoRR, 2024

2023

A functional analysis of omic network embedding spaces reveals key altered functions in cancer.

Sergio Doria-Belenguer, Alexandros Xenos, Gaia Ceddia, Noël Malod-Dognin, Natasa Przulj

Bioinform., May, 2023

2022

Identifying cellular cancer mechanisms through pathway-driven data integration.

Sam F. L. Windels, Noël Malod-Dognin, Natasa Przulj

Bioinform., 2022

2021

Linear functional organization of the omic embedding space.

Alexandros Xenos, Noël Malod-Dognin, S. Milinkovic, Natasa Przulj

Bioinform., 2021

Classification in biological networks with hypergraphlet kernels.

Jose Lugo-Martinez, Daniel Zeiberg, Thomas Gaudelet, Noël Malod-Dognin, Natasa Przulj, Predrag Radivojac

Bioinform., 2021

2020

Chromatin network markers of leukemia.

Noël Malod-Dognin, Vera Pancaldi, Alfonso Valencia, Natasa Przulj

Bioinform., 2020

2019

Graphlet Laplacians for topology-function and topology-disease relationships.

Sam F. L. Windels, Noël Malod-Dognin, Natasa Przulj

Bioinform., 2019

Functional geometry of protein interactomes.

Noël Malod-Dognin, Natasa Przulj

Bioinform., 2019

2018

Higher-order molecular organization as a source of biological function.

Thomas Gaudelet, Noël Malod-Dognin, Natasa Przulj

Bioinform., 2018

2017

Omics Data Complementarity Underlines Functional Cross-Communication in Yeast.

Noël Malod-Dognin, Natasa Przulj

J. Integr. Bioinform., 2017

Rebuttal to the Letter to the Editor in response to the paper: proper evaluation of alignment-free network comparison methods.

Ömer Nebil Yaveroglu, Noël Malod-Dognin, Tijana Milenkovic, Natasa Przulj

Bioinform., 2017

2016

Predictive Functional Connectivity of Real-World Systems.

Anida Sarajlic, Noël Malod-Dognin, Ömer Nebil Yaveroglu, Natasa Przulj

CoRR, 2016

Fuse: multiple network alignment via data fusion.

Vladimir Gligorijevic, Noël Malod-Dognin, Natasa Przulj

Bioinform., 2016

Patient-Specific Data Fusion for Cancer Stratification and Personalised Treatment.

Vladimir Gligorijevic, Noël Malod-Dognin, Natasa Przulj

Proceedings of the Biocomputing 2016: Proceedings of the Pacific Symposium, 2016

2015

L-GRAAL: Lagrangian graphlet-based network aligner.

Noël Malod-Dognin, Natasa Przulj

Bioinform., 2015

Topology-function conservation in protein-protein interaction networks.

Darren Davis, Ömer Nebil Yaveroglu, Noël Malod-Dognin, Aleksandar Stojmirovic, Natasa Przulj

Bioinform., 2015

2014

GR-Align: fast and flexible alignment of protein 3D structures using graphlet degree similarity.

Noël Malod-Dognin, Natasa Przulj

Bioinform., 2014

2012

CSA: comprehensive comparison of pairwise protein structure alignments.

Inken Wohlers, Noël Malod-Dognin, Rumen Andonov, Gunnar W. Klau

Nucleic Acids Res., 2012

2011

Maximum Contact Map Overlap Revisited.

Rumen Andonov, Noël Malod-Dognin, Nicola Yanev

J. Comput. Biol., 2011

Using Dominances for Solving the Protein Family Identification Problem.

Noël Malod-Dognin, Mathilde Le Boudic-Jamin, Pritish Kamath, Rumen Andonov

Proceedings of the Algorithms in Bioinformatics - 11th International Workshop, 2011

Shape Matching by Localized Calculations of Quasi-Isometric Subsets, with Applications to the Comparison of Protein Binding Patches.

Frédéric Cazals, Noël Malod-Dognin

Proceedings of the Pattern Recognition in Bioinformatics, 2011

2010

Protein Structure Comparison: From Contact Map Overlap Maximisation to Distance-based Alignment Search Tool. (La comparaison structurale des protéines : de la maximisation du recouvrement de cartes de contacts à l'alignement basé sur les distances).

Noël Malod-Dognin

PhD thesis, 2010

Maximum Cliques in Protein Structure Comparison.

Noël Malod-Dognin, Rumen Andonov, Nicola Yanev

Proceedings of the Experimental Algorithms, 9th International Symposium, 2010

SHREC'10 Track: Protein Model Classification.

Lazaros Mavridis, Vishwesh Venkatraman, David W. Ritchie, Naoto Morikawa, Rumen Andonov, Alexandre Cornu, Noël Malod-Dognin, Jacques Nicolas, Maja Temerinac-Ott, Marco Reisert, Hans Burkhardt, Apostolos Axenopoulos, Petros Daras

Proceedings of the 3rd Eurographics Workshop on 3D Object Retrieval, 2010

2008

An Efficient Lagrangian Relaxation for the Contact Map Overlap Problem.

Rumen Andonov, Nicola Yanev, Noël Malod-Dognin

Proceedings of the Algorithms in Bioinformatics, 8th International Workshop, 2008