Niranjan Nagarajan
Orcid: 0000-0003-0850-5604
According to our database1,
Niranjan Nagarajan
authored at least 25 papers
between 2003 and 2024.
Collaborative distances:
Collaborative distances:
Timeline
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Bibliography
2024
MetageNN: a memory-efficient neural network taxonomic classifier robust to sequencing errors and missing genomes.
BMC Bioinform., December, 2024
BMC Bioinform., December, 2024
2023
CREAMMIST: an integrative probabilistic database for cancer drug response prediction.
Nucleic Acids Res., January, 2023
2021
BEEM-Static: Accurate inference of ecological interactions from cross-sectional microbiome data.
PLoS Comput. Biol., 2021
TUGDA: task uncertainty guided domain adaptation for robust generalization of cancer drug response prediction from in vitro to in vivo settings.
Bioinform., 2021
Task Uncertainty Loss Reduce Negative Transfer in Asymmetric Multi-task Feature Learning (Student Abstract).
Proceedings of the Thirty-Fifth AAAI Conference on Artificial Intelligence, 2021
2020
Task Uncertainty Loss Reduce Negative Transfer in Asymmetric Multi-task Feature Learning.
CoRR, 2020
2018
2016
2012
FinIS: Improved in silico Finishing Using an Exact Quadratic Programming Formulation.
Proceedings of the Algorithms in Bioinformatics - 12th International Workshop, 2012
2011
Opera: Reconstructing Optimal Genomic Scaffolds with High-Throughput Paired-End Sequences.
J. Comput. Biol., 2011
2010
Finding Biologically Accurate Clusterings in Hierarchical Tree Decompositions Using the Variation of Information.
J. Comput. Biol., 2010
Alignment and clustering of phylogenetic markers - implications for microbial diversity studies.
BMC Bioinform., 2010
2009
Statistical Methods for Detecting Differentially Abundant Features in Clinical Metagenomic Samples.
PLoS Comput. Biol., 2009
Parametric Complexity of Sequence Assembly: Theory and Applications to Next Generation Sequencing.
J. Comput. Biol., 2009
Reliability and efficiency of algorithms for computing the significance of the Mann-Whitney test.
Comput. Stat., 2009
2008
Scaffolding and validation of bacterial genome assemblies using optical restriction maps.
Bioinform., 2008
FAST: Fourier transform based algorithms for significance testing of ungapped multiple alignments.
Bioinform., 2008
Uncovering Genomic Reassortments among Influenza Strains by Enumerating Maximal Bicliques.
Proceedings of the 2008 IEEE International Conference on Bioinformatics and Biomedicine, 2008
2007
Statistical Techniques for Biological Motif Discovery.
PhD thesis, 2007
2006
Apples to apples: improving the performance of motif finders and their significance analysis in the Twilight Zone.
Proceedings of the Proceedings 14th International Conference on Intelligent Systems for Molecular Biology 2006, 2006
2005
Computing the P-value of the information content from an alignment of multiple sequences.
Proceedings of the Proceedings Thirteenth International Conference on Intelligent Systems for Molecular Biology 2005, 2005
2004
Automatic prediction of protein domains from sequence information using a hybrid learning system.
Bioinform., 2004
A Faster Reliable Algorithm to Estimate the p-Value of the Multinomial llr Statistic.
Proceedings of the Algorithms in Bioinformatics, 4th International Workshop, 2004
2003
A multi-expert system for the automatic detection of protein domains from sequence information.
Proceedings of the Sventh Annual International Conference on Computational Biology, 2003