ISHAN: Sequence Homology Analysis Package. - Pratip Shil; Niraj Dudani; Pandit B. Vidyasagar (Silico Biol., 2006)

Run-Time Interoperability Between Neuronal Network Simulators Based on the MUSIC Framework. - Mikael Djurfeldt; Johannes Hjorth; Jochen M. Eppler; Niraj Dudani; Moritz Helias; Tobias C. Potjans; Upinder S. Bhalla; Markus Diesmann; Jeanette Hellgren Kotaleski; Örjan Ekeberg (Neuroinformatics, 2010)

MOOSE, the Multiscale Object-Oriented Simulation Environment. - Niraj Dudani; Upinder S. Bhalla; Subhasis Ray (Encyclopedia of Computational Neuroscience, 2014)