Nicole Radde

According to our database, Nicole Radde authored at least 28 papers between 2006 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2023

The impossible challenge of estimating non-existent moments of the Chemical Master Equation.

Vincent Wagner, Nicole Radde

Bioinform., 2023

2022

Quasi-Entropy Closure: a fast and reliable approach to close the moment equations of the Chemical Master Equation.

Vincent Wagner, Benjamin Castellaz, Marco Oesting, Nicole Radde

Bioinform., 2022

2017

Sampling-based Bayesian approaches reveal the importance of quasi-bistable behavior in cellular decision processes on the example of the MAPK signaling pathway in PC-12 cell lines.

Antje Jensch, Caterina Thomaseth, Nicole Radde

BMC Syst. Biol., 2017

2016

MEMO: multi-experiment mixture model analysis of censored data.

Eva-Maria Geissen, Jan Hasenauer, Stephanie Heinrich, Silke Hauf, Fabian J. Theis, Nicole Radde

Bioinform., 2016

2015

A computational model of PKD and CERT interactions at the trans-Golgi network of mammalian cells.

Patrick Weber, Mariana Hornjik, Monilola A. Olayioye, Angelika Hausser, Nicole Radde

BMC Syst. Biol., 2015

2014

Hamiltonian Monte Carlo methods for efficient parameter estimation in steady state dynamical systems.

Andrei Kramer, Ben Calderhead, Nicole Radde

BMC Bioinform., 2014

mcmc_clib-an advanced MCMC sampling package for ode models.

Andrei Kramer, Vassilios Stathopoulos, Mark A. Girolami, Nicole Radde

Bioinform., 2014

2013

iVUN: interactive Visualization of Uncertain biochemical reaction Networks.

Corinna Vehlow, Jan Hasenauer, Andrei Kramer, Andreas Raue, Sabine Hug, Jens Timmer, Nicole Radde, Fabian J. Theis, Daniel Weiskopf

BMC Bioinform., 2013

2012

Analyzing fixed points of intracellular regulation networks with interrelated feedback topology.

Nicole Radde

BMC Syst. Biol., 2012

Trajectory-oriented Bayesian experiment design versus Fisher A-optimal design: an in depth comparison study.

Patrick Weber, Andrei Kramer, Clemens Dingler, Nicole Radde

Bioinform., 2012

Uncertainty-aware visual analysis of biochemical reaction networks.

Corinna Vehlow, Jan Hasenauer, Andrei Kramer, Julian Heinrich, Nicole Radde, Frank Allgöwer, Daniel Weiskopf

Proceedings of the 2012 IEEE Symposium on Biological Data Visualization, 2012

2011

Identification of models of heterogeneous cell populations from population snapshot data.

Jan Hasenauer, Steffen Waldherr, Malgorzata Doszczak, Nicole Radde, Peter Scheurich, Frank Allgöwer

BMC Bioinform., 2011

2010

Towards experimental design using a Bayesian framework for parameter identification in dynamic intracellular network models.

Andrei Kramer, Nicole Radde

Proceedings of the International Conference on Computational Science, 2010

A maximum likelihood estimator for parameter distributions in heterogeneous cell populations.

Jan Hasenauer, Steffen Waldherr, Nicole Radde, Malgorzata Doszczak, Peter Scheurich, Frank Allgöwer

Proceedings of the International Conference on Computational Science, 2010

Graphical methods for analysing feedback in biological networks - A survey.

Nicole Radde, Nadav S. Bar, Murad Banaji

Int. J. Syst. Sci., 2010

Fixed point characterization of biological networks with complex graph topology.

Nicole Radde

Bioinform., 2010

Generic Bifurcations in the Dynamics of Biochemical Networks.

Steffen Waldherr, Frank Allgöwer, Nicole Radde

Proceedings of the IEEE International Conference on Control Applications, 2010

Computation of the Posterior Entropy in a Bayesian Framework for Parameter Estimation in Biological Networks.

Andrei Kramer, Jan Hasenauer, Frank Allgöwer, Nicole Radde

Proceedings of the IEEE International Conference on Control Applications, 2010

2009

The Impact of Time Delays on the Robustness of Biological Oscillators and the Effect of Bifurcations on the Inverse Problem.

Nicole Radde

EURASIP J. Bioinform. Syst. Biol., 2009

Inference of an oscillating model for the yeast cell cycle.

Nicole Radde, Lars Kaderali

Discret. Appl. Math., 2009

Modeling and simulation of nitrogen regulation in Corynebacterium glutamicum.

Jutta Gebert, Nicole Radde, Ulrich Faigle, Julia Strösser, Andreas Burkovski

Discret. Appl. Math., 2009

Long-term prediction of fish growth under varying ambient temperature using a multiscale dynamic model.

Nadav S. Bar, Nicole Radde

BMC Syst. Biol., 2009

2008

Inferring Gene Regulatory Networks from Expression Data.

Lars Kaderali, Nicole Radde

Proceedings of the Computational Intelligence in Bioinformatics, 2008

The Effect of Time Scale Differences and Time Delays on the Structural Stability of oscillations in a Two-Gene Network.

Nicole Radde

Adv. Complex Syst., 2008

2007

Modeling Non-Linear Dynamic Phenomena in Biochemical Networks

Nicole Radde

PhD thesis, 2007

Modeling gene regulatory networks with piecewise linear differential equations.

Jutta Gebert, Nicole Radde, Gerhard-Wilhelm Weber

Eur. J. Oper. Res., 2007

Bayesian Inference of Gene Regulatory Networks Using Gene Expression Time Series Data.

Nicole Radde, Lars Kaderali

Proceedings of the Bioinformatics Research and Development, First International Conference, 2007

2006

Systematic component selection for gene-network refinement.

Nicole Radde, Jutta Gebert, Christian V. Forst

Bioinform., 2006