Nezar Abdennur

According to our database, Nezar Abdennur authored at least 6 papers between 2020 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

Bioframe: operations on genomic intervals in <i>Pandas</i> dataframes.

Nezar Abdennur, Geoffrey Fudenberg, Ilya M. Flyamer, Aleksandra A. Galitsyna, Anton Goloborodko, Maxim Imakaev, Sergey Venev

Bioinform., February, 2024

Pairtools: From sequencing data to chromosome contacts.

Nezar Abdennur, Geoffrey Fudenberg, Ilya M. Flyamer, Aleksandra A. Galitsyna, Anton Goloborodko, Maxim Imakaev, Sergey Venev

PLoS Comput. Biol., 2024

Cooltools: Enabling high-resolution Hi-C analysis in Python.

Nezar Abdennur, Sameer Abraham, Geoffrey Fudenberg, Ilya M. Flyamer, Aleksandra A. Galitsyna, Anton Goloborodko, Maxim Imakaev, Betul A. Oksuz, Sergey Venev, Yao Xiao

PLoS Comput. Biol., 2024

anywidget: reusable widgets for interactive analysis and visualization in computational notebooks.

Trevor Manz, Nezar Abdennur, Nils Gehlenborg

J. Open Source Softw., 2024

2021

Scool: a new data storage format for single-cell Hi-C data.

Joachim Wolff, Nezar Abdennur, Rolf Backofen, Björn A. Grüning

Bioinform., 2021

2020

Cooler: scalable storage for Hi-C data and other genomically labeled arrays.

Nezar Abdennur, Leonid A. Mirny

Bioinform., 2020