Neil Moore

According to our database, Neil Moore authored at least 23 papers between 2001 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2024

RNA-clique: a method for computing genetic distances from RNA-seq data.

Andrew C. Tapia, Jerzy W. Jaromczyk, Neil Moore, Christopher L. Schardl

BMC Bioinform., December, 2024

2020

CURatio: Genome-Wide Phylogenomic Analysis Method Using Ratios of Total Branch Lengths.

Qiwen Kang, Neil Moore, Christopher L. Schardl, Ruriko Yoshida

IEEE ACM Trans. Comput. Biol. Bioinform., 2020

2017

Proceedings of the 16th Annual UT-KBRIN Bioinformatics Summit 2016: bioinformatics: Burns, TN, USA. April 21-23, 2017.

Eric C. Rouchka, Julia H. Chariker, David Tieri, Juw Won Park, Shreedharkumar D. Rajurkar, Vikas Singh, Nishchal K. Verma, Yan Cui, Mark L. Farman, Bradford Condon, Neil Moore, Jerzy W. Jaromczyk, Jolanta Jaromczyk, Daniel R. Harris, Patrick Calie, Eun Kyong Shin, Robert L. Davis, Arash Shaban-Nejad, Joshua M. Mitchell, Robert M. Flight, Qing Jun Wang, Richard M. Higashi, Teresa W.-M. Fan, Andrew N. Lane, Hunter N. B. Moseley, Liangqun Lu, Bernie J. Daigle, Xi Chen, Andrey Smelter, Li Chen, Bailey K. Phan, Nathaniel J. Serpico, Ethan G. Toney, Caroline E. Melton, Jennifer R. Mandel, Bernie J. Daigle Jr., Hao Chen, Kazi I. Zaman, Ramin Homayouni, Patrick J. Trainor, Samantha M. Carlisle, Andrew P. DeFilippis, Shesh N. Rai

BMC Bioinform., September, 2017

2016

Proceedings of the 15th Annual UT-KBRIN Bioinformatics Summit 2016: Cadiz, KY, USA. 8-10 April 2016.

Eric C. Rouchka, Julia H. Chariker, Benjamin J. Harrison, Juw Won Park, Xueyuan Cao, Stanley Pounds, Susana C. Raimondi, James R. Downing, Raul C. Ribeiro, Jeffrey Rubnitz, Jatinder Lamba, Bernie J. Daigle Jr., Deborah Burgess, Stephanie Gehrlich, John C. Carmen, Nicholas Johnson, Chandrakanth Emani, Kalpani De Silva, Michael P. Heaton, Theodore S. Kalbfleisch, Teeradache Viangteeravat, Rahul Mudunuri, Oluwaseun Ajayi, Fatih Sen, Eunice Y. Huang, Mohammad Mohebbi, Luaire Florian, Douglas J. Jackson, John F. Naber, Akm Sabbir, Sally R. Ellingson, Yuping Lu, Charles A. Phillips, Michael A. Langston, Rahul Kumar Sevakula, Raghuveer Thirukovalluru, Nishchal K. Verma, Yan Cui, Mohammed Sayed, Jing Wang, Qi Liu, Yu Shyr, Xiaofei Zhang, Naresh Prodduturi, Gavin R. Oliver, Diane Grill, Jie Na, Jeanette Eckel-Passow, Eric W. Klee, Michael M. Goodin, Mark L. Farman, Harrison Inocencio, Chanyong Jang, Jerzy W. Jaromczyk, Neil Moore, Kelly L. Sovacool, Leon Dent, Mike Izban, Sammed N. Mandape, Shruti S. Sakhare, Siddharth Pratap, Dana Marshall, M. Scotty Depriest, James N. MacLeod, Hanady Adam, Ethan Blandford, Joel Campbell, Joshua Castlen, Brittany Dixon, Ginger Gilbert, Aaron Hall, Philip Kreisle, Jessica Lasher, Bethany Oakes, Allison Speer, Maximilian Valentine, Naga Satya Venkateswara Ra Nagisetty, Rony Jose, Robert W. Rooney, David Hains

BMC Bioinform., August, 2016

2015

Validation and quality assurance for genome browser database exports.

Roger G. Chui, Jerzy W. Jaromczyk, Neil Moore, Christopher L. Schardl

BMC Bioinform., December, 2015

2014

Automating deployment of several GBrowse instances.

Neil Moore, Jerzy W. Jaromczyk, Christopher L. Schardl, Joedocei Hill, Devin Wright

BMC Bioinform., 2014

An adaptive landscape for training in the essentials of next gen sequencing data acquisition and bioinformatic analysis.

Mark L. Farman, Patrick Calie, Jerzy W. Jaromczyk, Jolanta Jaromczyk, Neil Moore, Daniel R. Harris, Christopher L. Schardl

BMC Bioinform., 2014

Video game bots as a theme for student software competitions.

Matthew Fahrbach, Jerzy W. Jaromczyk, Roy David Mobley, Neil Moore

Proceedings of the Computer Games: AI, 2014

2013

Using HPC for teaching and learning bioinformatics software: Benefits and challenges.

Tyler Parke, Mark L. Farman, Elizabeth Farnsworth, Derek Fox, Jerzy W. Jaromczyk, Jolanta Jaromczyk, Neil Moore, Christopher L. Schardl, Ruriko Yoshida, Patrick Calie

BMC Bioinform., 2013

FPD2GB2: Automating a transition from a customized genome browser to GBrowse2.

Roger G. Chui, Jerzy W. Jaromczyk, Neil Moore, Christopher L. Schardl

BMC Bioinform., 2013

2012

A linear-time algorithm for finding a maximum-length ORF in a splice graph.

Jerzy W. Jaromczyk, Neil Moore, Christopher L. Schardl

Int. J. Comput. Biol. Drug Des., 2012

Finding long protein products of alternatively spliced genes.

Neil Moore, Jerzy W. Jaromczyk, Christopher L. Schardl

BMC Bioinform., 2012

2011

Computational complexity of the problem of tree generation under fine-grained access control policies.

Neil Moore

Inf. Comput., 2011

Finding a longest open reading frame of an alternatively spliced gene.

Neil Moore, Jerzy W. Jaromczyk

Proceedings of the 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2011

2010

<i>Phylotree</i> - a toolkit for computing experiments with distance-based methods for genome coevolution.

Elissaveta G. Arnaoudova, Jerzy W. Jaromczyk, Neil Moore, Christopher L. Schardl, Ruriko Yoshida

BMC Bioinform., 2010

Reconciling two models of multihierarchical markup.

Neil Moore

Proceedings of the 13th International Workshop on the Web and Databases 2010, 2010

2009

Visualizing and sharing results in bioinformatics projects: GBrowse and GenBank exports.

Elissaveta G. Arnaoudova, Philip J. Bowens, Roger G. Chui, Randy D. Dinkins, Uljana Hesse, Jerzy W. Jaromczyk, Mitchell Martin, Paul Maynard, Neil Moore, Christopher L. Schardl

BMC Bioinform., 2009

The Halting Problem and Undecidability of Document Generation under Access Control for Tree Updates.

Neil Moore

Proceedings of the Language and Automata Theory and Applications, 2009

2006

Support for XML markup of image-based electronic editions.

Alex Dekhtyar, Ionut Emil Iacob, Jerzy W. Jaromczyk, Kevin Kiernan, Neil Moore, Dorothy C. Porter

Int. J. Digit. Libr., 2006

2005

Building Image-based Electronic Editions using the Edition Production Technology.

Alex Dekhtyar, Ionut Emil Iacob, Jerzy W. Jaromczyk, Kevin Kiernan, Neil Moore, Dorothy C. Porter

Bull. IEEE Tech. Comm. Digit. Libr., 2005

2004

A web interface to image-based concurrent markup using image maps.

Jerzy W. Jaromczyk, Miroslaw Kowaluk, Neil Moore

Proceedings of the Sixth ACM CIKM International Workshop on Web Information and Data Management (WIDM 2004), 2004

On Visualization of Complex Image-Basedmarkup.

Jerzy W. Jaromczyk, Miroslaw Kowaluk, Neil Moore

Proceedings of the International Conference on Computer Vision and Graphics, 2004

2001

Computing stable models in parallel.

Raphael A. Finkel, Victor W. Marek, Neil Moore, Miroslaw Truszczynski

Proceedings of the Answer Set Programming, 2001