Natalja Kurbatova

According to our database, Natalja Kurbatova authored at least 15 papers between 2007 and 2024.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of three.

2024

Open-Source Approach to GPU-Accelerated Substructure Search.

Andrew J. Whitehouse, Melchor Sanchez-Martinez, Seyedeh Maryam Salehi, Natalja Kurbatova, Euan Dean

J. Chem. Inf. Model., 2024

Good machine learning practices: Learnings from the modern pharmaceutical discovery enterprise.

Vladimir Makarov, Christophe Chabbert, Elina Koletou, Fotis E. Psomopoulos, Natalja Kurbatova, Samuel A. Ramirez, Chas Nelson, Prashant Natarajan, Bikalpa Neupane

Comput. Biol. Medicine, 2024

2021

Disease ontologies for knowledge graphs.

Natalja Kurbatova, Rowan Swiers

BMC Bioinform., 2021

2015

ArrayExpress update - simplifying data submissions.

Nikolay Kolesnikov, Emma Hastings, Maria Keays, Olga Melnichuk, Y. Amy Tang, Eleanor Williams, Miroslaw Dylag, Natalja Kurbatova, Marco Brandizi, Tony Burdett, Karyn Megy, Ekaterina Pilicheva, Gabriella Rustici, Andrew Tikhonov, Helen E. Parkinson, Robert Petryszak, Ugis Sarkans, Alvis Brazma

Nucleic Acids Res., 2015

2014

The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data.

Gautier Koscielny, Gagarine Yaikhom, Vivek Iyer, Terrence F. Meehan, Hugh Morgan, Julian Atienza-Herrero, Andrew Blake, Chao-Kung Chen, Richard Easty, Armida Di Fenza, Tanja Fiegel, Mark Grifiths, Alan Horne, Natasha A. Karp, Natalja Kurbatova, Jeremy C. Mason, Peter Matthews, Darren J. Oakley, Asfand Qazi, Jack Regnart, Ahmad Retha, Luis A. Santos, Duncan J. Sneddon, Jonathan Warren, Henrik Westerberg, Robert J. Wilson, David G. Melvin, Damian Smedley, Steve D. M. Brown, Paul Flicek, William C. Skarnes, Ann-Marie Mallon, Helen E. Parkinson

Nucleic Acids Res., 2014

2013

ArrayExpress update - trends in database growth and links to data analysis tools.

Gabriella Rustici, Nikolay Kolesnikov, Marco Brandizi, Tony Burdett, Miroslaw Dylag, Ibrahim Emam, Anna Farne, Emma Hastings, Jon C. Ison, Maria Keays, Natalja Kurbatova, James Malone, Roby Mani, Annalisa Mupo, Rui Pedro Pereira, Ekaterina Pilicheva, Johan Rung, Anjan Sharma, Y. Amy Tang, Tobias Ternent, Andrew Tikhonov, Danielle Welter, Eleanor Williams, Alvis Brazma, Helen E. Parkinson, Ugis Sarkans

Nucleic Acids Res., 2013

2012

Gene Expression Atlas update - a value-added database of microarray and sequencing-based functional genomics experiments.

Misha Kapushesky, Tomasz Adamusiak, Tony Burdett, Aedín C. Culhane, Anna Farne, Alexey Filippov, Ele Holloway, Andrey Klebanov, Nataliya Kryvych, Natalja Kurbatova, Pavel Kurnosov, James Malone, Olga Melnichuk, Robert Petryszak, Nikolay Pultsin, Gabriella Rustici, Andrew Tikhonov, Ravensara S. Travillian, Eleanor Williams, Andrey Zorin, Helen E. Parkinson, Alvis Brazma

Nucleic Acids Res., 2012

graph2tab, a library to convert experimental workflow graphs into tabular formats.

Marco Brandizi, Natalja Kurbatova, Ugis Sarkans, Philippe Rocca-Serra

Bioinform., 2012

2011

ArrayExpress update - an archive of microarray and high-throughput sequencing-based functional genomics experiments.

Helen E. Parkinson, Ugis Sarkans, Nikolay Kolesnikov, Niran Abeygunawardena, Tony Burdett, Miroslaw Dylag, Ibrahim Emam, Anna Farne, Emma Hastings, Ele Holloway, Natalja Kurbatova, Margus Lukk, James Malone, Roby Mani, Ekaterina Pilicheva, Gabriella Rustici, Anjan Sharma, Eleanor Williams, Tomasz Adamusiak, Marco Brandizi, Nataliya Sklyar, Alvis Brazma

Nucleic Acids Res., 2011

OntoCAT - simple ontology search and integration in Java, R and REST/JavaScript.

Tomasz Adamusiak, Tony Burdett, Natalja Kurbatova, K. Joeri van der Velde, Niran Abeygunawardena, Despoina Antonakaki, Misha Kapushesky, Helen E. Parkinson, Morris A. Swertz

BMC Bioinform., 2011

ontoCAT: an R package for ontology traversal and search.

Natalja Kurbatova, Tomasz Adamusiak, Pavel Kurnosov, Morris A. Swertz, Misha Kapushesky

Bioinform., 2011

2009

A System for Information Management in BioMedical Studies - SIMBioMS.

Maria Krestyaninova, Andris Zarins, Juris Viksna, Natalja Kurbatova, Peteris Rucevskis, Sudeshna Guha Neogi, Mike Gostev, Teemu Perheentupa, Juha Knuuttila, Amy Barrett, Ilkka Lappalainen, Johan Rung, Karlis Podnieks, Ugis Sarkans, Mark I. McCarthy, Alvis Brazma

Bioinform., 2009

2008

Detection of 3D atomic similarities and their use in the discrimination of small molecule protein-binding sites.

Rafael Najmanovich, Natalja Kurbatova, Janet M. Thornton

Proceedings of the ECCB'08 Proceedings, 2008

Exploration of Evolutionary Relations between Protein Structures.

Natalja Kurbatova, Juris Viksna

Proceedings of the Bioinformatics Research and Development, 2008

2007

Protein Structure Comparison Based on Fold Evolution.

Natalja Kurbatova, Laura Mancinska, Juris Viksna

Proceedings of the German Conference on Bioinformatics, 2007