Nasir M. Rajpoot

Orcid: 0000-0002-4706-1308

Affiliations:
  • University of Warwick, Department of Computer Science


According to our database1, Nasir M. Rajpoot authored at least 226 papers between 1998 and 2024.

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Bibliography

2024
LYSTO: The Lymphocyte Assessment Hackathon and Benchmark Dataset.
IEEE J. Biomed. Health Informatics, March, 2024

CoNIC Challenge: Pushing the frontiers of nuclear detection, segmentation, classification and counting.
Medical Image Anal., February, 2024

SynCLay: Interactive synthesis of histology images from bespoke cellular layouts.
Medical Image Anal., January, 2024

Consistency regularisation in varying contexts and feature perturbations for semi-supervised semantic segmentation of histology images.
Medical Image Anal., January, 2024

Social network analysis of cell networks improves deep learning for prediction of molecular pathways and key mutations in colorectal cancer.
Medical Image Anal., 2024

Unsupervised mutual transformer learning for multi-gigapixel Whole Slide Image classification.
Medical Image Anal., 2024

Mitosis detection, fast and slow: Robust and efficient detection of mitotic figures.
Medical Image Anal., 2024

Benchmarking Domain Generalization Algorithms in Computational Pathology.
CoRR, 2024

StainFuser: Controlling Diffusion for Faster Neural Style Transfer in Multi-Gigapixel Histology Images.
CoRR, 2024

An AI based Digital Score of Tumour-Immune Microenvironment Predicts Benefit to Maintenance Immunotherapy in Advanced Oesophagogastric Adenocarcinoma.
CoRR, 2024

TIAViz: A Browser-based Visualization Tool for Computational Pathology Models.
CoRR, 2024

On generalisability of segment anything model for nuclear instance segmentation in histology images.
CoRR, 2024

Dual attention model with reinforcement learning for classification of histology whole-slide images.
Comput. Medical Imaging Graph., 2024

An Automated Pipeline for Tumour-Infiltrating Lymphocyte Scoring in Breast Cancer.
Proceedings of the IEEE International Symposium on Biomedical Imaging, 2024

Cell Maps Representation for Lung Adenocarcinoma Growth Patterns Classification in Whole Slide Images.
Proceedings of the IEEE International Symposium on Biomedical Imaging, 2024

2023
A Federated Learning Approach to Tumor Detection in Colon Histology Images.
J. Medical Syst., December, 2023

An aggregation of aggregation methods in computational pathology.
Medical Image Anal., August, 2023



Handcrafted Histological Transformer (H2T): Unsupervised representation of whole slide images.
Medical Image Anal., April, 2023

Deep feature based cross-slide registration.
Comput. Medical Imaging Graph., March, 2023



One model is all you need: Multi-task learning enables simultaneous histology image segmentation and classification.
Medical Image Anal., 2023

Transformer-based Model for Oral Epithelial Dysplasia Segmentation.
CoRR, 2023

Domain Generalization in Computational Pathology: Survey and Guidelines.
CoRR, 2023

A Fully Automated and Explainable Algorithm for the Prediction of Malignant Transformation in Oral Epithelial Dysplasia.
CoRR, 2023

Synthesis of Annotated Colorectal Cancer Tissue Images from Gland Layout.
CoRR, 2023

CoNIC Challenge: Pushing the Frontiers of Nuclear Detection, Segmentation, Classification and Counting.
CoRR, 2023

Mimicking a Pathologist: Dual Attention Model for Scoring of Gigapixel Histology Images.
CoRR, 2023

Understanding metric-related pitfalls in image analysis validation.
CoRR, 2023

LYSTO: The Lymphocyte Assessment Hackathon and Benchmark Dataset.
CoRR, 2023

Nuclear Segmentation and Classification: On Color & Compression Generalization.
CoRR, 2023

Growth Pattern Fingerprinting for Automatic Analysis of Lung Adenocarcinoma Overall Survival.
IEEE Access, 2023

Accurate segmentation of nuclear instances using a double-stage neural network.
Proceedings of the Medical Imaging 2023: Digital and Computational Pathology, 2023

Embedding Space Augmentation for Weakly Supervised Learning in Whole-Slide Images.
Proceedings of the 20th IEEE International Symposium on Biomedical Imaging, 2023

Why is the Winner the Best?
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Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, 2023

2022








On Smart Gaze Based Annotation of Histopathology Images for Training of Deep Convolutional Neural Networks.
IEEE J. Biomed. Health Informatics, 2022

SlideGraph+: Whole slide image level graphs to predict HER2 status in breast cancer.
Medical Image Anal., 2022

Nucleus classification in histology images using message passing network.
Medical Image Anal., 2022

SAFRON: Stitching Across the Frontier Network for Generating Colorectal Cancer Histology Images.
Medical Image Anal., 2022

Stain-Robust Mitotic Figure Detection for MIDOG 2022 Challenge.
CoRR, 2022

TIAger: Tumor-Infiltrating Lymphocyte Scoring in Breast Cancer for the TiGER Challenge.
CoRR, 2022

Rank the triplets: A ranking-based multiple instance learning framework for detecting HPV infection in head and neck cancers using routine H&E images.
CoRR, 2022

Metrics reloaded: Pitfalls and recommendations for image analysis validation.
CoRR, 2022

Mitosis domain generalization in histopathology images - The MIDOG challenge.
CoRR, 2022

Deep Learning based Prediction of MSI in Colorectal Cancer via Prediction of the Status of MMR Markers.
CoRR, 2022

One Model is All You Need: Multi-Task Learning Enables Simultaneous Histology Image Segmentation and Classification.
CoRR, 2022

REET: robustness evaluation and enhancement toolbox for computational pathology.
Bioinform., 2022

A Novel Framework for Coarse-Grained Semantic Segmentation of Whole-Slide Images.
Proceedings of the Medical Image Understanding and Analysis - 26th Annual Conference, 2022

A Neural Architecture Search Based Framework for Segmentation of Epithelium, Nuclei and Oral Epithelial Dysplasia Grading.
Proceedings of the Medical Image Understanding and Analysis - 26th Annual Conference, 2022

Nuclear Segmentation and Classification: On Color and Compression Generalization.
Proceedings of the Machine Learning in Medical Imaging - 13th International Workshop, 2022

Morph-Net: End-to-End Prediction of Nuclear Morphological Features from Histology Images.
Proceedings of the Medical Optical Imaging and Virtual Microscopy Image Analysis, 2022

Multi-scale Attention-Based Multiple Instance Learning for Classification of Multi-gigapixel Histology Images.
Proceedings of the Computer Vision - ECCV 2022 Workshops, 2022

IMPaSh: A Novel Domain-Shift Resistant Representation for Colorectal Cancer Tissue Classification.
Proceedings of the Computer Vision - ECCV 2022 Workshops, 2022

2021

MoNuSAC2020: A Multi-Organ Nuclei Segmentation and Classification Challenge.
IEEE Trans. Medical Imaging, 2021

Self-Path: Self-Supervision for Classification of Pathology Images With Limited Annotations.
IEEE Trans. Medical Imaging, 2021

Editorial Computational Pathology.
IEEE J. Biomed. Health Informatics, 2021

Spatially Constrained Context-Aware Hierarchical Deep Correlation Filters for Nucleus Detection in Histology Images.
Medical Image Anal., 2021

Towards Launching AI Algorithms for Cellular Pathology into Clinical & Pharmaceutical Orbits.
CoRR, 2021

CoNIC: Colon Nuclei Identification and Counting Challenge 2022.
CoRR, 2021

FedDropoutAvg: Generalizable federated learning for histopathology image classification.
CoRR, 2021

SlideGraph+: Whole Slide Image Level Graphs to Predict HER2Status in Breast Cancer.
CoRR, 2021

L1-regularized neural ranking for risk stratification and its application to prediction of time to distant metastasis in luminal node negative chemotherapy naïve breast cancer patients.
CoRR, 2021

Semantic annotation for computational pathology: Multidisciplinary experience and best practice recommendations.
CoRR, 2021

Now You See It, Now You Dont: Adversarial Vulnerabilities in Computational Pathology.
CoRR, 2021

A digital score of tumour-associated stroma infiltrating lymphocytes predicts survival in head and neck squamous cell carcinoma.
CoRR, 2021

Deep Multi-Resolution Dictionary Learning for Histopathology Image Analysis.
CoRR, 2021

Classification of COVID-19 via Homology of CT-SCAN.
CoRR, 2021

Dense-CaptionNet: a Sentence Generation Architecture for Fine-grained Description of Image Semantics.
Cogn. Comput., 2021

Tumour Nuclear Morphometrics Predict Survival in Lung Adenocarcinoma.
IEEE Access, 2021

L<sub>1</sub>-Regularized Neural Ranking for Risk Stratification and Its Application to Prediction of Time to Distant Metastasis in Luminal Node Negative Chemotherapy Naïve Breast Cancer Patients.
Proceedings of the Machine Learning and Principles and Practice of Knowledge Discovery in Databases, 2021

All You Need is Color: Image Based Spatial Gene Expression Prediction Using Neural Stain Learning.
Proceedings of the Machine Learning and Principles and Practice of Knowledge Discovery in Databases, 2021

Simple non-iterative clustering and CNNs for coarse segmentation of breast cancer whole-slide images.
Proceedings of the Medical Imaging 2021: Digital Pathology, Online, February 15-19, 2021, 2021

Cells are Actors: Social Network Analysis with Classical ML for SOTA Histology Image Classification.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2021 - 24th International Conference, Strasbourg, France, September 27, 2021

Stain-Robust Mitotic Figure Detection for the Mitosis Domain Generalization Challenge.
Proceedings of the Biomedical Image Registration, Domain Generalisation and Out-of-Distribution Analysis - MICCAI 2021 Challenges: MIDOG 2021, MOOD 2021, and Learn2Reg 2021, Held in Conjunction with MICCAI 2021, Strasbourg, France, September 27, 2021

Simultaneous Nuclear Instance and Layer Segmentation in Oral Epithelial Dysplasia.
Proceedings of the IEEE/CVF International Conference on Computer Vision Workshops, 2021

A QuadTree Image Representation for Computational Pathology.
Proceedings of the IEEE/CVF International Conference on Computer Vision Workshops, 2021

Robust Interactive Semantic Segmentation of Pathology Images with Minimal User Input.
Proceedings of the IEEE/CVF International Conference on Computer Vision Workshops, 2021

Lizard: A Large-Scale Dataset for Colonic Nuclear Instance Segmentation and Classification.
Proceedings of the IEEE/CVF International Conference on Computer Vision Workshops, 2021

ALBRT: Cellular Composition Prediction in Routine Histology Images.
Proceedings of the IEEE/CVF International Conference on Computer Vision Workshops, 2021

Multiple Instance Captioning: Learning Representations From Histopathology Textbooks and Articles.
Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, 2021

A Novel Cell Map Representation for Weakly Supervised Prediction of ER & PR Status from H&E WSIs.
Proceedings of the MICCAI Workshop on Computational Pathology, 2021

2020
Context-Aware Convolutional Neural Network for Grading of Colorectal Cancer Histology Images.
IEEE Trans. Medical Imaging, 2020

A Multi-Organ Nucleus Segmentation Challenge.
IEEE Trans. Medical Imaging, 2020

Dense Steerable Filter CNNs for Exploiting Rotational Symmetry in Histology Images.
IEEE Trans. Medical Imaging, 2020

Multiplex Cellular Communities in Multi-Gigapixel Colorectal Cancer Histology Images for Tissue Phenotyping.
IEEE Trans. Image Process., 2020

FABnet: feature attention-based network for simultaneous segmentation of microvessels and nerves in routine histology images of oral cancer.
Neural Comput. Appl., 2020

NuClick: A deep learning framework for interactive segmentation of microscopic images.
Medical Image Anal., 2020

Cellular community detection for tissue phenotyping in colorectal cancer histology images.
Medical Image Anal., 2020

SAFRON: Stitching Across the Frontier for Generating Colorectal Cancer Histology Images.
CoRR, 2020

NuClick: A Deep Learning Framework for Interactive Segmentation of Microscopy Images.
CoRR, 2020

Multi-Task Learning in Histo-pathology for Widely Generalizable Model.
CoRR, 2020

PanNuke Dataset Extension, Insights and Baselines.
CoRR, 2020

Meta-SVDD: Probabilistic Meta-Learning for One-Class Classification in Cancer Histology Images.
CoRR, 2020

Automated grade classification of oral epithelial dysplasia using morphometric analysis of histology images.
Proceedings of the Medical Imaging 2020: Digital Pathology, 2020

Train Small, Generate Big: Synthesis of Colorectal Cancer Histology Images.
Proceedings of the Simulation and Synthesis in Medical Imaging, 2020

HydraMix-Net: A Deep Multi-task Semi-supervised Learning Approach for Cell Detection and Classification.
Proceedings of the Interpretable and Annotation-Efficient Learning for Medical Image Computing, 2020

Cross-Domain Knowledge Transfer for Prediction of Chemosensitivity in Ovarian Cancer Patients.
Proceedings of the 2020 IEEE/CVF Conference on Computer Vision and Pattern Recognition, 2020

Capturing Cellular Topology in Multi-Gigapixel Pathology Images.
Proceedings of the 2020 IEEE/CVF Conference on Computer Vision and Pattern Recognition, 2020

2019
Learning Where to See: A Novel Attention Model for Automated Immunohistochemical Scoring.
IEEE Trans. Medical Imaging, 2019

Fast ScanNet: Fast and Dense Analysis of Multi-Gigapixel Whole-Slide Images for Cancer Metastasis Detection.
IEEE Trans. Medical Imaging, 2019

Simultaneous Cell Detection and Classification in Bone Marrow Histology Images.
IEEE J. Biomed. Health Informatics, 2019

Micro-Net: A unified model for segmentation of various objects in microscopy images.
Medical Image Anal., 2019

Fast and accurate tumor segmentation of histology images using persistent homology and deep convolutional features.
Medical Image Anal., 2019

Hover-Net: Simultaneous segmentation and classification of nuclei in multi-tissue histology images.
Medical Image Anal., 2019

MILD-Net: Minimal information loss dilated network for gland instance segmentation in colon histology images.
Medical Image Anal., 2019

An information fusion framework for person localization via body pose in spectator crowds.
Inf. Fusion, 2019

NuClick: From Clicks in the Nuclei to Nuclear Boundaries.
CoRR, 2019

Context-Aware Convolutional Neural Network for Grading of Colorectal Cancer Histology Images.
CoRR, 2019

Nuclear Instance Segmentation Using a Proposal-Free Spatially Aware Deep Learning Framework.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2019, 2019

CGC-Net: Cell Graph Convolutional Network for Grading of Colorectal Cancer Histology Images.
Proceedings of the 2019 IEEE/CVF International Conference on Computer Vision Workshops, 2019

Deep Multiresolution Cellular Communities for Semantic Segmentation of Multi-Gigapixel Histology Images.
Proceedings of the 2019 IEEE/CVF International Conference on Computer Vision Workshops, 2019

Digital Tumor-Collagen Proximity Signature Predicts Survival in Diffuse Large B-Cell Lymphoma.
Proceedings of the Digital Pathology - 15th European Congress, 2019

Rota-Net: Rotation Equivariant Network for Simultaneous Gland and Lumen Segmentation in Colon Histology Images.
Proceedings of the Digital Pathology - 15th European Congress, 2019

PanNuke: An Open Pan-Cancer Histology Dataset for Nuclei Instance Segmentation and Classification.
Proceedings of the Digital Pathology - 15th European Congress, 2019

2018
Correlation Filters for Detection of Cellular Nuclei in Histopathology Images.
J. Medical Syst., 2018

XY Network for Nuclear Segmentation in Multi-Tissue Histology Images.
CoRR, 2018

Methods for Segmentation and Classification of Digital Microscopy Tissue Images.
CoRR, 2018

Leveraging Transfer Learning for Segmenting Lesions and their Attributes in Dermoscopy Images.
CoRR, 2018

Predicting breast tumor proliferation from whole-slide images: the TUPAC16 challenge.
CoRR, 2018

Is the winner really the best? A critical analysis of common research practice in biomedical image analysis competitions.
CoRR, 2018

MILD-Net: Minimal Information Loss Dilated Network for Gland Instance Segmentation in Colon Histology Images.
CoRR, 2018

Novel digital tissue phenotypic signatures of distant metastasis in colorectal cancer.
CoRR, 2018

Deep Autoencoder Features for Registration of Histology Images.
Proceedings of the Medical Image Understanding and Analysis - 22nd Conference, 2018

A Multi-resolution Deep Learning Framework for Lung Adenocarcinoma Growth Pattern Classification.
Proceedings of the Medical Image Understanding and Analysis - 22nd Conference, 2018

Classification of lung cancer histology images using patch-level summary statistics.
Proceedings of the Medical Imaging 2018: Digital Pathology, 2018

A bottom-up approach for tumour differentiation in whole slide images of lung adenocarcinoma.
Proceedings of the Medical Imaging 2018: Digital Pathology, 2018

Significance of Hyperparameter Optimization for Metastasis Detection in Breast Histology Images.
Proceedings of the Computational Pathology and Ophthalmic Medical Image Analysis, 2018

Nuclei Detection Using Mixture Density Networks.
Proceedings of the Machine Learning in Medical Imaging - 9th International Workshop, 2018

Cellular Community Detection for Tissue Phenotyping in Histology Images.
Proceedings of the Computational Pathology and Ophthalmic Medical Image Analysis, 2018

Uncertainty Driven Pooling Network for Microvessel Segmentation in Routine Histology Images.
Proceedings of the Computational Pathology and Ophthalmic Medical Image Analysis, 2018

Leveraging Unlabeled Whole-Slide-Images for Mitosis Detection.
Proceedings of the Computational Pathology and Ophthalmic Medical Image Analysis, 2018

SAMS-NET: Stain-aware multi-scale network for instance-based nuclei segmentation in histology images.
Proceedings of the 15th IEEE International Symposium on Biomedical Imaging, 2018

Context-Aware Learning Using Transferable Features for Classification of Breast Cancer Histology Images.
Proceedings of the Image Analysis and Recognition - 15th International Conference, 2018

Composition Loss for Counting, Density Map Estimation and Localization in Dense Crowds.
Proceedings of the Computer Vision - ECCV 2018, 2018

2017
Using Geodesic Space Density Gradients for Network Community Detection.
IEEE Trans. Knowl. Data Eng., 2017

Dual-Channel Active Contour Model for Megakaryocytic Cell Segmentation in Bone Marrow Trephine Histology Images.
IEEE Trans. Biomed. Eng., 2017

Gland segmentation in colon histology images: The glas challenge contest.
Medical Image Anal., 2017

Multi-resolution cell orientation congruence descriptors for epithelium segmentation in endometrial histology images.
Medical Image Anal., 2017

Her2 Challenge Contest: A Detailed Assessment of Automated Her2 Scoring Algorithms in Whole Slide Images of Breast Cancer Tissues.
CoRR, 2017

Representation-Aggregation Networks for Segmentation of Multi-Gigapixel Histology Images.
CoRR, 2017

Conceptual data sampling for breast cancer histology image classification.
Comput. Biol. Medicine, 2017

Simultaneous Cell Detection and Classification with an Asymmetric Deep Autoencoder in Bone Marrow Histology Images.
Proceedings of the Medical Image Understanding and Analysis - 21st Annual Conference, 2017

MIMONet: Gland Segmentation Using Multi-Input-Multi-Output Convolutional Neural Network.
Proceedings of the Medical Image Understanding and Analysis - 21st Annual Conference, 2017

Tumor Segmentation in Whole Slide Images Using Persistent Homology and Deep Convolutional Features.
Proceedings of the Medical Image Understanding and Analysis - 21st Annual Conference, 2017

Hybrid deep autoencoder with Curvature Gaussian for detection of various types of cells in bone marrow trephine biopsy images.
Proceedings of the 14th IEEE International Symposium on Biomedical Imaging, 2017

MIMO-Net: A multi-input multi-output convolutional neural network for cell segmentation in fluorescence microscopy images.
Proceedings of the 14th IEEE International Symposium on Biomedical Imaging, 2017

2016
Locality Sensitive Deep Learning for Detection and Classification of Nuclei in Routine Colon Cancer Histology Images.
IEEE Trans. Medical Imaging, 2016

A model of the spatial tumour heterogeneity in colorectal adenocarcinoma tissue.
BMC Bioinform., 2016

Subcellular protein expression models for microsatellite instability in colorectal adenocarcinoma tissue images.
BMC Bioinform., 2016

Robust normalization protocols for multiplexed fluorescence bioimage analysis.
BioData Min., 2016

Persistent Homology for Fast Tumor Segmentation in Whole Slide Histology Images.
Proceedings of the 20th Conference on Medical Image Understanding and Analysis, 2016

Handcrafted features with convolutional neural networks for detection of tumor cells in histology images.
Proceedings of the 13th IEEE International Symposium on Biomedical Imaging, 2016

Stain deconvolution of histology images via independent component analysis in the wavelet domain.
Proceedings of the 13th IEEE International Symposium on Biomedical Imaging, 2016

How divided is a cell? Eigenphase nuclei for classification of mitotic phase in cancer histology images.
Proceedings of the 2016 IEEE-EMBS International Conference on Biomedical and Health Informatics, 2016

2015
A Stochastic Polygons Model for Glandular Structures in Colon Histology Images.
IEEE Trans. Medical Imaging, 2015

A Global Covariance Descriptor for Nuclear Atypia Scoring in Breast Histopathology Images.
IEEE J. Biomed. Health Informatics, 2015

Registration of thermal and visible light images of diseased plants using silhouette extraction in the wavelet domain.
Pattern Recognit., 2015

Assessment of algorithms for mitosis detection in breast cancer histopathology images.
Medical Image Anal., 2015

Cell words: Modelling the visual appearance of cells in histopathology images.
Comput. Medical Imaging Graph., 2015

Localisation of luminal epithelium edge in digital histopathology images of IHC stained slides of endometrial biopsies.
Comput. Medical Imaging Graph., 2015

Cell Nuclei Segmentation in Variable Intensity Fluorescence Microscopy Images.
Proceedings of the Medical Image Understanding and Analysis, 2015

A Discriminative Framework for Stain Deconvolution of Histopathology Images in the Maxwellian Space.
Proceedings of the Medical Image Understanding and Analysis, 2015

Multi-class stain separation using independent component analysis.
Proceedings of the Medical Imaging 2015: Digital Pathology, 2015

A circumscribing active contour model for delineation of nuclei and membranes of megakaryocytes in bone marrow trephine biopsy images.
Proceedings of the Medical Imaging 2015: Digital Pathology, 2015

A novel texture descriptor for detection of glandular structures in colon histology images.
Proceedings of the Medical Imaging 2015: Digital Pathology, 2015

Anisotropic tubular filtering for automatic detection of acid-fast bacilli in Ziehl-Neelsen stained sputum smear samples.
Proceedings of the Medical Imaging 2015: Digital Pathology, 2015

A Spatially Constrained Deep Learning Framework for Detection of Epithelial Tumor Nuclei in Cancer Histology Images.
Proceedings of the Patch-Based Techniques in Medical Imaging, 2015

A Novel Cell Orientation Congruence Descriptor for Superpixel Based Epithelium Segmentation in Endometrial Histology Images.
Proceedings of the Patch-Based Techniques in Medical Imaging, 2015

A random polygons model of glandular structures in colon histology images.
Proceedings of the 12th IEEE International Symposium on Biomedical Imaging, 2015

A model of the spatial microenvironment of the colonic crypt.
Proceedings of the 12th IEEE International Symposium on Biomedical Imaging, 2015

2014
A Nonlinear Mapping Approach to Stain Normalization in Digital Histopathology Images Using Image-Specific Color Deconvolution.
IEEE Trans. Biomed. Eng., 2014

Cell phenotyping in multi-tag fluorescent bioimages.
Neurocomputing, 2014

DiSWOP: a novel measure for cell-level protein network analysis in localized proteomics image data.
Bioinform., 2014

A fast method for approximate registration of whole-slide images of serial sections using local curvature.
Proceedings of the Medical Imaging 2014: Digital Pathology, 2014

A Bayesian framework for cell-level protein network analysis for multivariate proteomics image data.
Proceedings of the Medical Imaging 2014: Digital Pathology, 2014

Geodesic Geometric Mean of Regional Covariance Descriptors as an Image-Level Descriptor for Nuclear Atypia Grading in Breast Histology Images.
Proceedings of the Machine Learning in Medical Imaging - 5th International Workshop, 2014

On generating cell exemplars for detection of mitotic cells in breast cancer histopathology images.
Proceedings of the 36th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2014

2013
A novel framework for exploratory analysis of highly variable morphology of migrating epithelial cells.
Proceedings of the 35th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2013

2012
A multiresolution framework for local similarity based image denoising.
Pattern Recognit., 2012

Special issue on microscopy image analysis for biomedical applications.
Mach. Vis. Appl., 2012

Spatiotemporal maps of CaMKII in dendritic spines.
J. Comput. Neurosci., 2012

A Gamma-Gaussian mixture model for detection of mitotic cells in breast cancer histopathology images.
Proceedings of the 21st International Conference on Pattern Recognition, 2012

Automated Segmentation and Tracking of Dynamic Focal Adhesions in Time-Lapse Fluorescence Microscopy.
Proceedings of the Neural Information Processing - 19th International Conference, 2012

A Novel Paradigm for Mining Cell Phenotypes in Multi-tag Bioimages Using a Locality Preserving Nonlinear Embedding.
Proceedings of the Neural Information Processing - 19th International Conference, 2012

2011
Hybrid Diversification Operator-Based Evolutionary Approach Towards Tomographic Image Reconstruction.
IEEE Trans. Image Process., 2011

BioIMAX: A Web 2.0 approach for easy exploratory and collaborative access to multivariate bioimage data.
BMC Bioinform., 2011

2010
Special Issue on New Advances in Video-Based Gait Analysis and Applications: Challenges and Solutions.
IEEE Trans. Syst. Man Cybern. Part B, 2010

Pattern Recognition in Histopathological Images: An ICPR 2010 Contest.
Proceedings of the Recognizing Patterns in Signals, Speech, Images and Videos, 2010

2009
Texture Based Classification of Hyperspecrtal Colon Biopsy Samples Using CLBP.
Proceedings of the 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Boston, MA, USA, June 28, 2009

Multilateral filtering: A novel framework for generic similarity-based image denoising.
Proceedings of the International Conference on Image Processing, 2009

VillageFinder: Segmentation of Nucleated Villages in Satellite Imagery.
Proceedings of the British Machine Vision Conference, 2009

2008
Adaptive Discriminant Wavelet Packet Transform and Local Binary Patterns for Meningioma Subtype Classification.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2008

Flexible synapse detection in fluorescence micrographs by modeling human expert grading.
Proceedings of the 2008 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2008

Discrete Wavelet Diffusion for Image Denoising.
Proceedings of the Image and Signal Processing - 3rd International Conference, 2008

Estimation of Dense, Non-rigid Motion Fields from a Multi-camera Array Using a Hierarchical Mixture Model.
Proceedings of the Articulated Motion and Deformable Objects, 5th International Conference, 2008

2007
Surface Estimation and Tracking using Sequential MCMC Methods for Video Based Rendering.
Proceedings of the International Conference on Image Processing, 2007

Unsupervised Learning of Shape Manifolds.
Proceedings of the British Machine Vision Conference 2007, 2007

Bayesian Surface Estimation from Multiple Cameras Using a Prior Based on the Visual Hull and its Application to Image Based Rendering.
Proceedings of the British Machine Vision Conference 2007, 2007

2006
Texture Classification with Ants.
Proceedings of the International Conference on Image Processing, 2006

2005
Light Field Reconstruction Using a Planar Patch Model.
Proceedings of the Image Analysis, 14th Scandinavian Conference, 2005

Image denoising using multiscale directional cosine bases.
Proceedings of the 2005 International Conference on Image Processing, 2005

Estimating Planar Patches for Light Field Reconstruction.
Proceedings of the British Machine Vision Conference 2005, Oxford, UK, September 2005, 2005

2004
SVM Optimization for Hyperspectral Colon Tissue Cell Classification.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2004, 2004

Radon/ridgelet signature for image authentication.
Proceedings of the 2004 International Conference on Image Processing, 2004

Adaptive wavelet restoration of noisy video sequences.
Proceedings of the 2004 International Conference on Image Processing, 2004

Model Based Optimal Bit Allocation.
Proceedings of the 2004 Data Compression Conference (DCC 2004), 2004

2003
Adaptive wavelet packet basis selection for zerotree image coding.
IEEE Trans. Image Process., 2003

Stack-Run Adaptive Wavelet Image Coding.
Proceedings of the 2003 Data Compression Conference (DCC 2003), 2003

Discriminant Feature Selection for Texture Classification.
Proceedings of the British Machine Vision Conference, 2003

2002
Less Redundant Codes for Variable Size Dictionaries.
Proceedings of the 2002 Data Compression Conference (DCC 2002), 2002

2001
Adaptive wavelet image compression.
PhD thesis, 2001

The Effect of Flexible Parsing for Dynamic Dictionary-Based Data Compression.
ACM J. Exp. Algorithmics, 2001

A new basis selection paradigm for wavelet packet image coding.
Proceedings of the 2001 International Conference on Image Processing, 2001

1999
On Zerotree Quantization for Embedded Wavelet Packet Image Coding.
Proceedings of the 1999 International Conference on Image Processing, 1999

1998
Implementation and Experimental Evaluation of Flexible Parsing for Dynamic Dictionary Based Data Compression.
Proceedings of the Algorithm Engineering, 2nd International Workshop, 1998


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