Nagarajan Vaidehi

According to our database, Nagarajan Vaidehi authored at least 10 papers between 1997 and 2019.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2019

Prediction of Conformation Specific Thermostabilizing Mutations for Class A G Protein-Coupled Receptors.

Suvamay Jana, Soumadwip Ghosh, Sanychen Muk, Benjamin Levy, Nagarajan Vaidehi

J. Chem. Inf. Model., 2019

2017

How Does the Proliferating Cell Nuclear Antigen Modulate Binding Specificity to Multiple Partner Proteins?

Hubert Li, Manbir Sandhu, Linda H. Malkas, Robert J. Hickey, Nagarajan Vaidehi

J. Chem. Inf. Model., December, 2017

2014

Computational Method To Identify Druggable Binding Sites That Target Protein-Protein Interactions.

Hubert Li, Vinod Kasam, Christofer S. Tautermann, Daniel Seeliger, Nagarajan Vaidehi

J. Chem. Inf. Model., 2014

Protein Structure Refinement of CASP Target Proteins Using GNEIMO Torsional Dynamics Method.

Adrien B. Larsen, Jeffrey R. Wagner, Abhinandan Jain, Nagarajan Vaidehi

J. Chem. Inf. Model., 2014

GneimoSim: A modular internal coordinates molecular dynamics simulation package.

Adrien B. Larsen, Jeffrey R. Wagner, Saugat Kandel, Romelia Salomón-Ferrer, Nagarajan Vaidehi, Abhinandan Jain

J. Comput. Chem., 2014

2013

Advanced techniques for constrained internal coordinate molecular dynamics.

Jeffrey R. Wagner, Gouthaman S. Balaraman, Michiel J. M. Niesen, Adrien B. Larsen, Abhinandan Jain, Nagarajan Vaidehi

J. Comput. Chem., 2013

2011

Importance of Receptor Flexibility in Binding of Cyclam Compounds to the Chemokine Receptor CXCR4.

Alfonso Lam, Supriyo Bhattacharya, Kevin Patel, Spencer Hall, Allen Mao, Nagarajan Vaidehi

J. Chem. Inf. Model., 2011

2010

Allosteric antagonist binding sites in class B GPCRs: corticotropin receptor 1.

Supriyo Bhattacharya, Govindan Subramanian, Spencer Hall, Jianping Lin, Abdelazize Laoui, Nagarajan Vaidehi

J. Comput. Aided Mol. Des., 2010

2005

The MPSim-Dock hierarchical docking algorithm: Application to the eight trypsin inhibitor cocrystals.

Art E. Cho, John A. Wendel, Nagarajan Vaidehi, Peter M. Kekenes-Huskey, Wely B. Floriano, Prabal K. Maiti, William A. Goddard III

J. Comput. Chem., 2005

1997

Molecular dynamics for very large systems on massively parallel computers: The MPSim program.

Kian-Tat Lim, Sharon Brunett, Mihail Iotov, Richard B. McClurg, Nagarajan Vaidehi, Siddharth Dasgupta, Stephen Taylor, William A. Goddard III

J. Comput. Chem., 1997