Mohammad Vahed

According to our database, Mohammad Vahed authored at least 7 papers between 2019 and 2024.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2024

Analytical code sharing practices in biomedical research.

Nitesh Kumar Sharma, Ram Ayyala, Dhrithi Deshpande, Yesha Patel, Viorel Munteanu, Dumitru Ciorba, Viorel Bostan, Andrada Fiscutean, Mohammad Vahed, Aditya Sarkar, Ruiwei Guo, Andrew Moore, Nicholas Darci-Maher, Nicole Nogoy, Malak S. Abedalthagafi, Serghei Mangul

PeerJ Comput. Sci., 2024

2023

Response to 'comment on rigorous benchmarking of T cell receptor repertoire profiling methods for cancer RNA sequencing' by Davydov A.N.; Bolotin D.A.; Poslavsky S. V. and Chudakov D.M.

Yu-Ning Huang, Mohammad Vahed, Kerui Peng, Houda Alachkar, Serghei Mangul

Briefings Bioinform., September, 2023

Rigorous benchmarking of T-cell receptor repertoire profiling methods for cancer RNA sequencing.

Kerui Peng, Theodore S. Nowicki, Katie Campbell, Mohammad Vahed, Dandan Peng, Yiting Meng, Anish Nagareddy, Yu-Ning Huang, Aaron Karlsberg, Zachary Miller, Jaqueline J. Brito, Brian B. Nadel, Victoria M. Pak, Malak S. Abedalthagafi, Amanda M. Burkhardt, Houda Alachkar, Antoni Ribas, Serghei Mangul

Briefings Bioinform., July, 2023

T-Ridership: A web tool for reprogramming public transportation fleets to minimize COVID-19 transmission.

Saba Imani, Majid Vahed, Shreya Satodia, Mohammad Vahed

SoftwareX, May, 2023

2022

BML: a versatile web server for bipartite motif discovery.

Mohammad Vahed, Majid Vahed, Lana X. Garmire

Briefings Bioinform., 2022

2019

The initial stage of structural transformation of Aβ₄₂ peptides from the human and mole rat in the presence of Fe²⁺ and Fe³⁺: Related to Alzheimer's disease.

Mohammad Vahed, Aaron Sweeney, Hiroshi Shirasawa, Majid Vahed

Comput. Biol. Chem., 2019

G-rich VEGF aptamer as a potential inhibitor of chitin trafficking signal in emerging opportunistic yeast infection.

Mohammad Vahed, Gholamreza Ahmadian, Niyoosha Ameri, Majid Vahed

Comput. Biol. Chem., 2019