Mohammad-Hadi Foroughmand-Araabi

According to our database, Mohammad-Hadi Foroughmand-Araabi authored at least 16 papers between 2012 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

Weighted centroid trees: a general approach to summarize phylogenies in single-labeled tumor mutation tree inference.

Hamed Vasei, Mohammad-Hadi Foroughmand-Araabi, Amir Daneshgar

Bioinform., 2024

2023

An Approximation Algorithm for Ancestral Maximum-Likelihood and Phylogeography Inference Problems under Time Reversible Markov Evolutionary Models.

Mohammad-Hadi Foroughmand-Araabi, Sama Goliaei, Kasra Alishahi

CoRR, 2023

2022

Mean isoperimetry with control on outliers: Exact and approximation algorithms.

Morteza Alimi, Amir Daneshgar, Mohammad-Hadi Foroughmand-Araabi

Theor. Comput. Sci., 2022

Scelestial: Fast and accurate single-cell lineage tree inference based on a Steiner tree approximation algorithm.

Mohammad-Hadi Foroughmand-Araabi, Sama Goliaei, Alice C. McHardy

PLoS Comput. Biol., 2022

2021

Abstract Geometrical Computation 10: An Intrinsically Universal Family of Signal Machines.

Florent Becker, Tom Besson, Jérôme Durand-Lose, Aurélien Emmanuel, Mohammad-Hadi Foroughmand-Araabi, Sama Goliaei, Shahrzad Heydarshahi

ACM Trans. Comput. Theory, 2021

Conifer: clonal tree inference for tumor heterogeneity with single-cell and bulk sequencing data.

Leila Baghaarabani, Sama Goliaei, Mohammad-Hadi Foroughmand-Araabi, Seyed Peyman Shariatpanahi, Bahram Goliaei

BMC Bioinform., 2021

2020

A novel pattern matching algorithm for genomic patterns related to protein motifs.

Mohammad-Hadi Foroughmand-Araabi, Sama Goliaei, Bahram Goliaei

J. Bioinform. Comput. Biol., 2020

2018

Modeling the probability distribution of the bacterial burst size via a game-theoretic approach.

Seyed Amir Malekpour, Parsa Pakzad, Mohammad-Hadi Foroughmand-Araabi, Sama Goliaei, Ruzbeh Tusserkani, Bahram Goliaei, Mehdi Sadeghi

J. Bioinform. Comput. Biol., 2018

An O(log^1.5n log log n) Approximation Algorithm for Mean Isoperimetry and Robust k-means.

Morteza Alimi, Amir Daneshgar, Mohammad-Hadi Foroughmand-Araabi

CoRR, 2018

An Intrinsically Universal Family of Signal Machines.

Florent Becker, Jérôme Durand-Lose, Mohammad-Hadi Foroughmand-Araabi, Sama Goliaei

CoRR, 2018

2017

Computational Complexity of Wavelength-Based Machine with Slightly Interacting Sets.

Sama Goliaei, Mohammad-Hadi Foroughmand-Araabi

Int. J. Unconv. Comput., 2017

2015

Codon usage and protein sequence pattern dependency in different organisms: A Bioinformatics approach.

Mohammad-Hadi Foroughmand-Araabi, Bahram Goliaei, Kasra Alishahi, Mehdi Sadeghi, Sama Goliaei

J. Bioinform. Comput. Biol., 2015

2014

On the complexity of nonuniform wavelength-based machine.

Sama Goliaei, Mohammad-Hadi Foroughmand-Araabi

Nat. Comput., 2014

Global Topology of Codon Usage Equality Networks of Escherichia Coli Essential Genes.

Mohammad-Hadi Foroughmand-Araabi, Sama Goliaei, Bahram Goliaei

Proceedings of the International Work-Conference on Bioinformatics and Biomedical Engineering, 2014

2013

Light Ray Concentration Reduces the Complexity of the Wavelength-Based Machine on PSPACE Languages.

Sama Goliaei, Mohammad-Hadi Foroughmand-Araabi

Proceedings of the Unconventional Computation and Natural Computation, 2013

2012

Lower Bounds on the Complexity of the Wavelength-Based Machine.

Sama Goliaei, Mohammad-Hadi Foroughmand-Araabi

Proceedings of the Unconventional Computation and Natural Computation, 2012