Minoru Kanehisa
Orcid: 0000-0001-6123-540XAffiliations:
- Kyoto University, Institute for Chemical Research, Japan
According to our database1,
Minoru Kanehisa
authored at least 90 papers
between 1984 and 2023.
Collaborative distances:
Collaborative distances:
Timeline
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Online presence:
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on zbmath.org
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on orcid.org
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on id.loc.gov
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on kanehisa.jp
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on isni.org
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on dl.acm.org
On csauthors.net:
Bibliography
2023
Nucleic Acids Res., January, 2023
2021
2020
KofamKOALA: KEGG Ortholog assignment based on profile HMM and adaptive score threshold.
Bioinform., 2020
2019
2017
Nucleic Acids Res., 2017
2016
Nucleic Acids Res., 2016
Identification of Enzyme Genes Using Chemical Structure Alignments of Substrate-Product Pairs.
J. Chem. Inf. Model., 2016
2014
DINIES: drug-target interaction network inference engine based on supervised analysis.
Nucleic Acids Res., 2014
Nucleic Acids Res., 2014
PIERO ontology for analysis of biochemical transformations: Effective implementation of reaction information in the IUBMB enzyme list.
J. Bioinform. Comput. Biol., 2014
2013
Quant. Biol., 2013
Nucleic Acids Res., 2013
Modular Architecture of Metabolic Pathways Revealed by Conserved Sequences of Reactions.
J. Chem. Inf. Model., 2013
KCF-S: KEGG Chemical Function and Substructure for improved interpretability and prediction in chemical bioinformatics.
BMC Syst. Biol., 2013
2012
Nucleic Acids Res., 2012
Nucleic Acids Res., 2012
Population Model-Based Inter-Diplotype Similarity Measure for Accurate Diplotype Clustering.
J. Comput. Biol., 2012
2011
KaPPA-View4: a metabolic pathway database for representation and analysis of correlation networks of gene co-expression and metabolite co-accumulation and omics data.
Nucleic Acids Res., 2011
J. Chem. Inf. Model., 2011
MUCHA: multiple chemical alignment algorithm to identify building block substructures of orphan secondary metabolites.
BMC Bioinform., 2011
2010
Nucleic Acids Res., 2010
KEGG for representation and analysis of molecular networks involving diseases and drugs.
Nucleic Acids Res., 2010
Nucleic Acids Res., 2010
Drug-target interaction prediction from chemical, genomic and pharmacological data in an integrated framework.
Bioinform., 2010
2009
J. Chem. Inf. Model., 2009
E-zyme: predicting potential EC numbers from the chemical transformation pattern of substrate-product pairs.
Bioinform., 2009
2008
A new efficient probabilistic model for mining labeled ordered trees applied to glycobiology.
ACM Trans. Knowl. Discov. Data, 2008
Nucleic Acids Res., 2008
varDB: a pathogen-specific sequence database of protein families involved in antigenic variation.
Bioinform., 2008
Prediction of drug-target interaction networks from the integration of chemical and genomic spaces.
Proceedings of the Proceedings 16th International Conference on Intelligent Systems for Molecular Biology (ISMB), 2008
Proceedings of the ECCB'08 Proceedings, 2008
Proceedings of the 6th Asia-Pacific Bioinformatics Conference, 2008
2007
Nucleic Acids Res., 2007
VisANT 3.0: new modules for pathway visualization, editing, prediction and construction.
Nucleic Acids Res., 2007
Systematic Analysis of Enzyme-Catalyzed Reaction Patterns and Prediction of Microbial Biodegradation Pathways.
J. Chem. Inf. Model., 2007
BMC Bioinform., 2007
The commonality of protein interaction networks determined in neurodegenerative disorders (NDDs).
Bioinform., 2007
Proceedings of the Algebraic Biology, Second International Conference, 2007
2006
Nucleic Acids Res., 2006
EGassembler: online bioinformatics service for large-scale processing, clustering and assembling ESTs and genomic DNA fragments.
Nucleic Acids Res., 2006
Nucleic Acids Res., 2006
BMC Bioinform., 2006
Quantitative elementary mode analysis of metabolic pathways: the example of yeast glycolysis.
BMC Bioinform., 2006
Partial correlation coefficient between distance matrices as a new indicator of protein-protein interactions.
Bioinform., 2006
Proceedings of the Twelfth ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, 2006
Proceedings of the Proceedings 14th International Conference on Intelligent Systems for Molecular Biology 2006, 2006
Proceedings of the Proceedings 14th International Conference on Intelligent Systems for Molecular Biology 2006, 2006
A 6-Approximation Algorithm for Computing Smallest Common AoN-Supertree with Application to the Reconstruction of Glycan Trees.
Proceedings of the Algorithms and Computation, 17th International Symposium, 2006
2005
Utilizing Evolutionary Information and Gene Expression Data for Estimating Gene Networks with Bayesian Network Models.
J. Bioinform. Comput. Biol., 2005
The inference of protein-protein interactions by co-evolutionary analysis is improved by excluding the information about the phylogenetic relationships.
Bioinform., 2005
Prediction of glycan structures from gene expression data based on glycosyltransferase reactions.
Bioinform., 2005
Fast and accurate database homology search using upper bounds of local alignment scores.
Bioinform., 2005
Supervised enzyme network inference from the integration of genomic data and chemical information.
Proceedings of the Proceedings Thirteenth International Conference on Intelligent Systems for Molecular Biology 2005, 2005
A quadratic programming approach for decomposing steady-state metabolic flux distributions onto elementary modes.
Proceedings of the ECCB/JBI'05 Proceedings, Fourth European Conference on Computational Biology/Sixth Meeting of the Spanish Bioinformatics Network (Jornadas de BioInformática), Palacio de Congresos, Madrid, Spain, September 28, 2005
2004
KCaM (KEGG Carbohydrate Matcher): a software tool for analyzing the structures of carbohydrate sugar chains.
Nucleic Acids Res., 2004
BMC Bioinform., 2004
Proceedings of the Proceedings Twelfth International Conference on Intelligent Systems for Molecular Biology/Third European Conference on Computational Biology 2004, 2004
Application of a new probabilistic model for recognizing complex patterns in glycans.
Proceedings of the Proceedings Twelfth International Conference on Intelligent Systems for Molecular Biology/Third European Conference on Computational Biology 2004, 2004
2003
Prediction of protein subcellular locations by support vector machines using compositions of amino acids and amino acid pairs.
Bioinform., 2003
Extraction of correlated gene clusters from multiple genomic data by generalized kernel canonical correlation analysis.
Proceedings of the Eleventh International Conference on Intelligent Systems for Molecular Biology, June 29, 2003
Extracting active pathways from gene expression data.
Proceedings of the European Conference on Computational Biology (ECCB 2003), 2003
2002
Nucleic Acids Res., 2002
Nucleic Acids Res., 2002
Graph-Driven Feature Extraction From Microarray Data Using Diffusion Kernels and Kernel CCA.
Proceedings of the Advances in Neural Information Processing Systems 15 [Neural Information Processing Systems, 2002
2000
Sequence comparison to graph comparison--a new generation of algorithms for network analysis of interacting molecules (abstract only).
Proceedings of the Fourth Annual International Conference on Computational Molecular Biology, 2000
1999
Systematic Detection of Protein Structural Motifs.
Proceedings of the Pattern Discovery in Biomolecular Data: Tools, 1999
1994
Development of an integrated Database for Genome Mapping and Nucleotide Sequences.
Proceedings of the 27th Annual Hawaii International Conference on System Sciences (HICSS-27), 1994
1993
Comput. Appl. Biosci., 1993
Comput. Appl. Biosci., 1993
1988
Comput. Appl. Biosci., 1988
1985
1984
Nucleic Acids Res., 1984
A relational database system for the maintenance and verification of the Los Alamos sequence library.
Nucleic Acids Res., 1984
Use of statistical criteria for screening potential homologies in nucleic acid sequences.
Nucleic Acids Res., 1984