Mingzhou Song

Orcid: 0000-0002-6883-6547

Affiliations:
  • New Mexico State University, Department of Computer Science, Las Cruces, NM, USA


According to our database1, Mingzhou Song authored at least 34 papers between 2000 and 2023.

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Bibliography

2023
Circular Silhouette and a Fast Algorithm.
IEEE Trans. Pattern Anal. Mach. Intell., November, 2023

2022
Inference of trajectory presence by tree dimension and subset specificity by subtree cover.
PLoS Comput. Biol., 2022

Statistical evidence for the presence of trajectory in single-cell data.
BMC Bioinform., 2022

Overcoming biases in causal inference of molecular interactions.
Bioinform., 2022

2021
Fast Optimal Circular Clustering and Applications on Round Genomes.
IEEE ACM Trans. Comput. Biol. Bioinform., 2021

Fundamental gene network rewiring at the second order within and across mammalian systems.
Bioinform., 2021

2020
Efficient weighted univariate clustering maps outstanding dysregulated genomic zones in human cancers.
Bioinform., 2020

Optimality, Accuracy, and Efficiency of an Exact Functional Test.
Proceedings of the Twenty-Ninth International Joint Conference on Artificial Intelligence, 2020

Joint Grid Discretization for Biological Pattern Discovery.
Proceedings of the BCB '20: 11th ACM International Conference on Bioinformatics, 2020

Three Co-expression Pattern Types across Microbial Transcriptional Networks of Plankton in Two Oceanic Waters.
Proceedings of the BCB '20: 11th ACM International Conference on Bioinformatics, 2020

2019
A Fast Exact Functional Test for Directional Association and Cancer Biology Applications.
IEEE ACM Trans. Comput. Biol. Bioinform., 2019

Evaluating Model-free Directional Dependency Methods on Single-cell RNA Sequencing Data with Severe Dropout.
Proceedings of the ICBRA '19: 6th International Conference on Bioinformatics Research and Applications, 2019

2018
Scrutinizing functional interaction networks from RNA-binding proteins to their targets in cancer.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

2017
Simulating Noisy, Nonparametric, and Multivariate Discrete Patterns.
R J., 2017

2011
Ckmeans.1d.dp: Optimal k-means Clustering in One Dimension by Dynamic Programming.
R J., 2011

Integrated cellular and gene interaction modelling of pattern formation.
Int. J. Comput. Biol. Drug Des., 2011

Conserved and differential gene interactions in dynamical biological systems.
Bioinform., 2011

2010
Efficient and exact maximum likelihood quantisation of genomic features using dynamic programming.
Int. J. Data Min. Bioinform., 2010

Integrated cellular and gene interaction model for cell migration in embryonic development.
Proceedings of the 2010 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2010

2009
Reconstructing Generalized Logical Networks of Transcriptional Regulation in Mouse Brain from Temporal Gene Expression Data.
EURASIP J. Bioinform. Syst. Biol., 2009

Statistical Analysis of Discrete Dynamical System Models for Biological Networks.
Proceedings of the International Joint Conferences on Bioinformatics, 2009

Comparative Generalized Logic Modeling Reveals Differential Gene Interactions during Cell Cycle Exit in Drosophila Wing Development.
Proceedings of the German Conference on Bioinformatics 2009, 2009

Comparative Identification of Differential Interactions from Trajectories of Dynamic Biological Networks.
Proceedings of the German Conference on Bioinformatics 2009, 2009

2008
Comparison of Cluster Representations from Partial Second- to Full Fourth-Order Cross Moments for Data Stream Clustering.
Proceedings of the 8th IEEE International Conference on Data Mining (ICDM 2008), 2008

2007
Maximum Likelihood Quantization of Genomic Features Using Dynamic Programming.
Proceedings of the Sixth International Conference on Machine Learning and Applications, 2007

2006
A spike sorting framework using nonparametric detection and incremental clustering.
Neurocomputing, 2006

A Linear Discrete Dynamic System Model for Temporal Gene Interaction and Regulatory Network Influence in Response to Bioethanol Conversion Inhibitor HMF for Ethanologenic Yeast.
Proceedings of the Systems Biology and Computational Proteomics, 2006

Detecting Low Complexity Clusters by Skewness and Kurtosis in Data Stream Clustering.
Proceedings of the International Symposium on Artificial Intelligence and Mathematics, 2006

2003
Estimating Recombination Rate Distribution by Optimal Quantization.
Proceedings of the 2nd IEEE Computer Society Bioinformatics Conference, 2003

2002
Integrated Surface Optimization for 3-D Freehand Echocardiography.
IEEE Trans. Medical Imaging, 2002

Optimally Quantized and Smoothed Histograms.
Proceedings of the 6th Joint Conference on Information Science, 2002

2000
Single View Computer Vision in Polyhedral World: Geometric Inference and Performance Characterization.
Proceedings of the 15th International Conference on Pattern Recognition, 2000

Algorithm Performance Contest.
Proceedings of the 15th International Conference on Pattern Recognition, 2000

Ultrasound Imaging Simulation and Echocardiographic Image Synthesis.
Proceedings of the 2000 International Conference on Image Processing, 2000


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