Mingxiang Teng

According to our database, Mingxiang Teng authored at least 18 papers between 2009 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

An Epigenomic fingerprint of human cancers by landscape interrogation of super enhancers at the constituent level.

Xiang Liu, Nancy Gillis, Chang Jiang, Anthony McCofie, Timothy I. Shaw, Aik Choon Tan, Bo Zhao, Lixin Wan, Derek R. Duckett, Mingxiang Teng

PLoS Comput. Biol., February, 2024

2023

PATH-SURVEYOR: pathway level survival enquiry for immuno-oncology and drug repurposing.

Alyssa N. Obermayer, Darwin Chang, Gabrielle Nobles, Mingxiang Teng, Aik Choon Tan, Xuefeng Wang, Y. Ann Chen, Steven Eschrich, Paulo C. Rodriguez, G. Daniel Grass, Soheil Meshinchi, Ahmad Tarhini, Dung-tsa Chen, Timothy I. Shaw

BMC Bioinform., December, 2023

2021

TIMEx: tumor-immune microenvironment deconvolution web-portal for bulk transcriptomics using pan-cancer scRNA-seq signatures.

Mengyu Xie, Kyubum Lee, John H. Lockhart, Scott D. Cukras, Rodrigo Carvajal, Amer A. Beg, Elsa R. Flores, Mingxiang Teng, Christine H. Chung, Aik Choon Tan

Bioinform., 2021

2019

Simulating genetically heterozygous genomes in the tumour tissue according to its clonal evolution history.

Yan-Shuo Chu, Mingxiang Teng, Yadong Wang

Int. J. Comput. Biol. Drug Des., 2019

2018

Modeling and correct the GC bias of tumor and normal WGS data for SCNA based tumor subclonal population inferring.

Yan-Shuo Chu, Mingxiang Teng, Yadong Wang

BMC Bioinform., 2018

2017

WDNfinder: A method for minimum driver node set detection and analysis in directed and weighted biological network.

Yan-Shuo Chu, Zhenxing Wang, Rongjie Wang, Ningyi Zhang, Jie Li, Yang Hu, Mingxiang Teng, Yadong Wang

J. Bioinform. Comput. Biol., 2017

Pysubsim-tree: A package for simulating tumor genomes according to tumor evolution history.

Yan-Shuo Chu, Ling Wang, Rongjie Wang, Mingxiang Teng, Yadong Wang

Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017

Pre-SCNAClonal: Efficient GC bias correction for SCNA based tumor subclonal populations inferring.

Yan-Shuo Chu, Mingxiang Teng, Zhenxing Wang, Yongtian Wang, Yadong Wang

Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017

2016

rHAT: fast alignment of noisy long reads with regional hashing.

Bo Liu, Dengfeng Guan, Mingxiang Teng, Yadong Wang

Bioinform., 2016

DMcompress: Dynamic Markov models for bacterial genome compression.

Rongjie Wang, Mingxiang Teng, Yang Bai, Tianyi Zang, Yadong Wang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016

2015

Family genome browser: visualizing genomes with pedigree information.

Liran Juan, Yongzhuang Liu, Yongtian Wang, Mingxiang Teng, Tianyi Zang, Yadong Wang

Bioinform., 2015

2014

The personal genome browser: visualizing functions of genetic variants.

Liran Juan, Mingxiang Teng, Tianyi Zang, Yafeng Hao, Zhenxing Wang, Chengwu Yan, Yongzhuang Liu, Jie Li, Tianjiao Zhang, Yadong Wang

Nucleic Acids Res., 2014

2012

regSNPs: a strategy for prioritizing regulatory single nucleotide substitutions.

Mingxiang Teng, Shoji Ichikawa, Leah R. Padgett, Yadong Wang, Matthew E. Mort, David N. Cooper, Daniel L. Koller, Tatiana Foroud, Howard J. Edenberg, Michael J. Econs, Yunlong Liu

Bioinform., 2012

2011

A modulated empirical Bayes model for identifying topological and temporal estrogen receptor α regulatory networks in breast cancer.

Changyu Shen, Yi-Wen Huang, Yunlong Liu, Guohua Wang, Yuming Zhao, Zhiping Wang, Mingxiang Teng, Yadong Wang, David A. Flockhart, Todd C. Skaar, Pearlly Yan, Kenneth P. Nephew, Tim Hui-Ming Huang, Lang Li

BMC Syst. Biol., 2011

Empirical bayes model comparisons for differential methylation analysis.

Mingxiang Teng, Yadong Wang, Yunlong Liu, Seongho Kim, Curtis Balch, Kenneth P. Nephew, Lang Li

Proceedings of the 2011 IEEE International Workshop on Genomic Signal Processing and Statistics, 2011

2010

Prioritization of disease microRNAs through a human phenome-microRNAome network.

Qinghua Jiang, Yangyang Hao, Guohua Wang, Liran Juan, Tianjiao Zhang, Mingxiang Teng, Yunlong Liu, Yadong Wang

BMC Syst. Biol., 2010

2009

miR2Disease: a manually curated database for microRNA deregulation in human disease.

Qinghua Jiang, Yadong Wang, Yangyang Hao, Liran Juan, Mingxiang Teng, Xinjun Zhang, Meimei Li, Guohua Wang, Yunlong Liu

Nucleic Acids Res., 2009

Enabling Data Analysis on High-Throughput Data in Large Data Depository Using Web-Based Analysis Platform - A Case Study on Integrating QUEST with GenePattern in Epigenetics Research.

Terry Camerlengo, Hatice Gulcin Ozer, Pearlly Yan, Jeffrey D. Parvin, Tim Hui-Ming Huang, Kun Huang, Mingxiang Teng, Lang Li, Yunlong Liu, Francisco Perez, Tahsin M. Kurç

Proceedings of the 2009 IEEE International Conference on Bioinformatics and Biomedicine, 2009