Mikhail G. Dozmorov

According to our database, Mikhail G. Dozmorov authored at least 28 papers between 2007 and 2024.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2024

Machine and deep learning methods for predicting 3D genome organization.

Brydon P. G. Wall, My Nguyen, J. Chuck Harrell, Mikhail G. Dozmorov

CoRR, 2024

2023

bootRanges: flexible generation of null sets of genomic ranges for hypothesis testing.

Wancen Mu, Eric S. Davis, Stuart Lee, Mikhail G. Dozmorov, Douglas H. Phanstiel, Michael I. Love

Bioinform., May, 2023

matchRanges: generating null hypothesis genomic ranges via covariate-matched sampling.

Eric S. Davis, Wancen Mu, Stuart Lee, Mikhail G. Dozmorov, Michael I. Love, Douglas H. Phanstiel

Bioinform., May, 2023

excluderanges: exclusion sets for T2T-CHM13, GRCm39, and other genome assemblies.

Jonathan D. Ogata, Wancen Mu, Eric S. Davis, Bingjie Xue, J. Chuck Harrell, Nathan C. Sheffield, Douglas H. Phanstiel, Michael I. Love, Mikhail G. Dozmorov

Bioinform., April, 2023

2022

preciseTAD: a transfer learning framework for 3D domain boundary prediction at base-pair resolution.

Spiro C. Stilianoudakis, Maggie A. Marshall, Mikhail G. Dozmorov

Bioinform., 2022

2020

A method for estimating coherence of molecular mechanisms in major human disease and traits.

Mikhail G. Dozmorov, Kellen Garrison Cresswell, Silviu-Alin Bacanu, Carl F. Craver, Mark Reimers, Kenneth S. Kendler

BMC Bioinform., 2020

Correction to: SpectralTAD: an R package for defining a hierarchy of topologically associated domains using spectral clustering.

Kellen Garrison Cresswell, John C. Stansfield, Mikhail G. Dozmorov

BMC Bioinform., 2020

SpectralTAD: an R package for defining a hierarchy of topologically associated domains using spectral clustering.

Kellen Garrison Cresswell, John C. Stansfield, Mikhail G. Dozmorov

BMC Bioinform., 2020

2019

multiHiCcompare: joint normalization and comparative analysis of complex Hi-C experiments.

John C. Stansfield, Kellen Garrison Cresswell, Mikhail G. Dozmorov

Bioinform., 2019

Disease classification: from phenotypic similarity to integrative genomics and beyond.

Mikhail G. Dozmorov

Briefings Bioinform., 2019

2018

HiCcompare: an R-package for joint normalization and comparison of HI-C datasets.

John C. Stansfield, Kellen Garrison Cresswell, Vladimir I. Vladimirov, Mikhail G. Dozmorov

BMC Bioinform., 2018

2017

Proceedings of the 2017 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference.

Jonathan D. Wren, Mikhail G. Dozmorov, Inimary T. Toby, Bindu Nanduri, Ramin Homayouni, Prashanti Manda, Shraddha Thakkar

BMC Bioinform., 2017

Epigenomic annotation-based interpretation of genomic data: from enrichment analysis to machine learning.

Mikhail G. Dozmorov

Bioinform., 2017

2016

Proceedings of the 2016 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference.

Jonathan D. Wren, Inimary T. Toby, Huxiao Hong, Bindu Nanduri, Rakesh Kaundal, Mikhail G. Dozmorov, Shraddha Thakkar

BMC Bioinform., 2016

Improving sensitivity of linear regression-based cell type-specific differential expression deconvolution with per-gene vs. global significance threshold.

Edmund R. Glass, Mikhail G. Dozmorov

BMC Bioinform., 2016

GenomeRunner web server: regulatory similarity and differences define the functional impact of SNP sets.

Mikhail G. Dozmorov, Lukas R. Cara, Cory B. Giles, Jonathan D. Wren

Bioinform., 2016

2015

Detrimental effects of duplicate reads and low complexity regions on RNA- and ChIP-seq data.

Mikhail G. Dozmorov, Indra Adrianto, Cory B. Giles, Edmund R. Glass, Stuart B. Glenn, Courtney Montgomery, Kathy L. Sivils, Lorin E. Olson, Tomoaki Iwayama, Willard M. Freeman, Christopher J. Lessard, Jonathan D. Wren

BMC Bioinform., December, 2015

2014

Proceedings of the 2014 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference.

Jonathan D. Wren, Mikhail G. Dozmorov, Dennis Burian, Andy D. Perkins, Chaoyang Zhang, Peter Hoyt, Rakesh Kaundal

BMC Bioinform., 2014

2013

Proceedings of the 2013 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference.

Jonathan D. Wren, Mikhail G. Dozmorov, Dennis Burian, Rakesh Kaundal, Andy D. Perkins, Edward J. Perkins, Doris M. Kupfer, Gordon K. Springer

BMC Bioinform., 2013

mirCoX: a database of miRNA-mRNA expression correlations derived from RNA-seq meta-analysis.

Cory B. Giles, Reshmi Girijadevi, Mikhail G. Dozmorov, Jonathan D. Wren

BMC Bioinform., 2013

Systematic classification of non-coding RNAs by epigenomic similarity.

Mikhail G. Dozmorov, Cory B. Giles, Kristi A. Koelsch, Jonathan D. Wren

BMC Bioinform., 2013

2012

Proceedings of the 2012 MidSouth computational biology and bioinformatics society (MCBIOS) conference.

Jonathan D. Wren, Mikhail G. Dozmorov, Dennis Burian, Rakesh Kaundal, Susan Bridges, Doris M. Kupfer

BMC Bioinform., 2012

Genome<i>Runner</i>: automating genome exploration.

Mikhail G. Dozmorov, Lukas R. Cara, Cory B. Giles, Jonathan D. Wren

Bioinform., 2012

2011

Proceedings of the 2011 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference.

Jonathan D. Wren, Doris M. Kupfer, Edward J. Perkins, Susan Bridges, Stephen Winters-Hilt, Mikhail G. Dozmorov, Ulisses M. Braga-Neto

BMC Bioinform., 2011

High-throughput processing and normalization of one-color microarrays for transcriptional meta-analyses.

Mikhail G. Dozmorov, Jonathan D. Wren

BMC Bioinform., 2011

Predicting gene ontology from a global meta-analysis of 1-color microarray experiments.

Mikhail G. Dozmorov, Cory B. Giles, Jonathan D. Wren

BMC Bioinform., 2011

2008

From microarray to biology: an integrated experimental, statistical and in silico analysis of how the extracellular matrix modulates the phenotype of cancer cells.

Mikhail G. Dozmorov, Kimberly D. Kyker, Paul J. Hauser, Ricardo Saban, David D. Buethe, Igor Dozmorov, Michael Centola, Daniel J. Culkin, Robert E. Hurst

BMC Bioinform., 2008

2007

Systems biology approach for mapping the response of human urothelial cells to infection by <i>Enterococcus faecalis</i>.

Mikhail G. Dozmorov, Kimberly D. Kyker, Ricardo Saban, Nathan Shankar, Arto S. Baghdayan, Michael Centola, Robert E. Hurst

BMC Bioinform., 2007