Mike Tyers

According to our database, Mike Tyers authored at least 25 papers between 2004 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

RGFN: Synthesizable Molecular Generation Using GFlowNets.

Michal Koziarski, Andrei Rekesh, Dmytro Shevchuk, Almer van der Sloot, Piotr Gainski, Yoshua Bengio, Cheng-Hao Liu, Mike Tyers, Robert A. Batey

CoRR, 2024

Generative Active Learning for the Search of Small-molecule Protein Binders.

Maksym Korablyov, Cheng-Hao Liu, Moksh Jain, Almer M. van der Sloot, Eric Jolicoeur, Edward Ruediger, Andrei Cristian Nica, Emmanuel Bengio, Kostiantyn Lapchevskyi, Daniel St-Cyr, Doris Alexandra Schuetz, Victor Ion Butoi, Jarrid Rector-Brooks, Simon Blackburn, Leo Feng, Hadi Nekoei, Sai Krishna Gottipati, Priyesh Vijayan, Prateek Gupta, Ladislav Rampásek, Sasikanth Avancha, Pierre-Luc Bacon, William L. Hamilton, Brooks Paige, Sanchit Misra, Stanislaw Kamil Jastrzebski, Bharat Kaul, Doina Precup, José Miguel Hernández-Lobato, Marwin H. S. Segler, Michael M. Bronstein, Anne Marinier, Mike Tyers, Yoshua Bengio

CoRR, 2024

2022

Graph-Based Active Machine Learning Method for Diverse and Novel Antimicrobial Peptides Generation and Selection.

Bonaventure F. P. Dossou, Dianbo Liu, Xu Ji, Moksh Jain, Almer M. van der Sloot, Roger Palou, Michael Tyers, Yoshua Bengio

CoRR, 2022

RECOVER: sequential model optimization platform for combination drug repurposing identifies novel synergistic compounds in vitro.

Paul Bertin, Jarrid Rector-Brooks, Deepak Sharma, Thomas Gaudelet, Andrew Anighoro, Torsten Gross, Francisco Martinez-Pena, Eileen L. Tang, Suraj M. S, Cristian Regep, Jeremy B. R. Hayter, Maksym Korablyov, Nicholas Valiante, Almer van der Sloot, Mike Tyers, Charles Roberts, Michael M. Bronstein, Luke L. Lairson, Jake P. Taylor-King, Yoshua Bengio

CoRR, 2022

Overview of the COVID-19 text mining tool interactive demonstration track in BioCreative VII.

Andrew Chatr-aryamontri, Lynette Hirschman, Karen E. Ross, Rose Oughtred, Martin Krallinger, Kara Dolinski, Mike Tyers, Tonia Korves, Cecilia N. Arighi

Database J. Biol. Databases Curation, 2022

2019

The BioGRID interaction database: 2019 update.

Rose Oughtred, Chris Stark, Bobby-Joe Breitkreutz, Jennifer M. Rust, Lorrie Boucher, Christie S. Chang, Nadine Kolas, Lara O'Donnell, Genie Leung, Rochelle McAdam, Frederick Zhang, Sonam Dolma, Andrew Willems, Jasmin Coulombe-Huntington, Andrew Chatr-aryamontri, Kara Dolinski, Mike Tyers

Nucleic Acids Res., 2019

2017

The BioGRID interaction database: 2017 update.

Andrew Chatr-aryamontri, Rose Oughtred, Lorrie Boucher, Jennifer M. Rust, Christie S. Chang, Nadine Kolas, Lara O'Donnell, Sara Oster, Chandra L. Theesfeld, Adnane Sellam, Chris Stark, Bobby-Joe Breitkreutz, Kara Dolinski, Mike Tyers

Nucleic Acids Res., 2017

The BioC-BioGRID corpus: full text articles annotated for curation of protein-protein and genetic interactions.

Rezarta Islamaj Dogan, Sun Kim, Andrew Chatr-aryamontri, Christie S. Chang, Rose Oughtred, Jennifer M. Rust, W. John Wilbur, Donald C. Comeau, Kara Dolinski, Mike Tyers

Database J. Biol. Databases Curation, 2017

2016

BioCreative V BioC track overview: collaborative biocurator assistant task for BioGRID.

Sun Kim, Rezarta Islamaj Dogan, Andrew Chatr-aryamontri, Christie S. Chang, Rose Oughtred, Jennifer M. Rust, Riza Batista-Navarro, Jacob Carter, Sophia Ananiadou, Sérgio Matos, André Santos, David Campos, José Luís Oliveira, Onkar Singh, Jitendra Jonnagaddala, Hong-Jie Dai, Emily Chia-Yu Su, Yung-Chun Chang, Yu-Chen Su, Chun-Han Chu, Chien Chin Chen, Wen-Lian Hsu, Yifan Peng, Cecilia N. Arighi, Cathy H. Wu, K. Vijay-Shanker, Ferhat Aydin, Zehra Melce Hüsünbeyi, Arzucan Özgür, Soo-Yong Shin, Dongseop Kwon, Kara Dolinski, Mike Tyers, W. John Wilbur, Donald C. Comeau

Database J. Biol. Databases Curation, 2016

2015

The BioGRID interaction database: 2015 update.

Andrew Chatr-aryamontri, Bobby-Joe Breitkreutz, Rose Oughtred, Lorrie Boucher, Sven Heinicke, Daici Chen, Chris Stark, Ashton Breitkreutz, Nadine Kolas, Lara O'Donnell, Teresa Reguly, Julie Nixon, Lindsay Ramage, Andrew G. Winter, Adnane Sellam, Christie S. Chang, Jodi E. Hirschman, Chandra L. Theesfeld, Jennifer M. Rust, Michael S. Livstone, Kara Dolinski, Mike Tyers

Nucleic Acids Res., 2015

2013

The BioGRID interaction database: 2013 update.

Andrew Chatr-aryamontri, Bobby-Joe Breitkreutz, Sven Heinicke, Lorrie Boucher, Andrew G. Winter, Chris Stark, Julie Nixon, Lindsay Ramage, Nadine Kolas, Lara O'Donnell, Teresa Reguly, Ashton Breitkreutz, Adnane Sellam, Daici Chen, Christie S. Chang, Jennifer M. Rust, Michael S. Livstone, Rose Oughtred, Kara Dolinski, Mike Tyers

Nucleic Acids Res., 2013

The PhosphoGRID <i>Saccharomyces cerevisiae</i> protein phosphorylation site database: version 2.0 update.

Ivan Sadowski, Bobby-Joe Breitkreutz, Chris Stark, Ting-Cheng Su, Matthew Dahabieh, Sheetal Raithatha, Wendy Bernhard, Rose Oughtred, Kara Dolinski, Kris Barreto, Mike Tyers

Database J. Biol. Databases Curation, 2013

2012

MolClass: a web portal to interrogate diverse small molecule screen datasets with different computational models.

Jan Wildenhain, Nicholas FitzGerald, Mike Tyers

Bioinform., 2012

How to link ontologies and protein-protein interactions to literature: text-mining approaches and the BioCreative experience.

Martin Krallinger, Florian Leitner, Miguel Vazquez, David Salgado, Christophe Marcelle, Mike Tyers, Alfonso Valencia, Andrew Chatr-aryamontri

Database J. Biol. Databases Curation, 2012

2011

The BioGRID Interaction Database: 2011 update.

Chris Stark, Bobby-Joe Breitkreutz, Andrew Chatr-aryamontri, Lorrie Boucher, Rose Oughtred, Michael S. Livstone, Julie Nixon, Kimberly Van Auken, Xiaodong Wang, Xiaoqi Shi, Teresa Reguly, Jennifer M. Rust, Andrew G. Winter, Kara Dolinski, Mike Tyers

Nucleic Acids Res., 2011

The Protein-Protein Interaction tasks of BioCreative III: classification/ranking of articles and linking bio-ontology concepts to full text.

Martin Krallinger, Miguel Vazquez, Florian Leitner, David Salgado, Andrew Chatr-aryamontri, Andrew G. Winter, Livia Perfetto, Leonardo Briganti, Luana Licata, Marta Iannuccelli, Luisa Castagnoli, Gianni Cesareni, Mike Tyers, Gerold Schneider, Fabio Rinaldi, Robert Leaman, Graciela Gonzalez, Sérgio Matos, Sun Kim, W. John Wilbur, Luis M. Rocha, Hagit Shatkay, Ashish V. Tendulkar, Shashank Agarwal, Feifan Liu, Xinglong Wang, Rafal Rak, Keith Noto, Charles Elkan, Zhiyong Lu

BMC Bioinform., 2011

Benchmarking of the 2010 BioCreative Challenge III text-mining competition by the BioGRID and MINT interaction databases.

Andrew Chatr-aryamontri, Andrew G. Winter, Livia Perfetto, Leonardo Briganti, Luana Licata, Marta Iannuccelli, Luisa Castagnoli, Gianni Cesareni, Mike Tyers

BMC Bioinform., 2011

BioGRID REST Service, BiogridPlugin2 and BioGRID WebGraph: new tools for access to interaction data at BioGRID.

Andrew G. Winter, Jan Wildenhain, Mike Tyers

Bioinform., 2011

An Ontology-Based Approach to Linking Model Organisms and Resources to Human Diseases.

Chris Mungall, David Anderson, Anita E. Bandrowski, Brian A. Canada, Andrew Chatr-aryamontri, Keith C. Cheng, P. Michael Conn, Kara Dolinski, Mark H. Ellisman, Janan T. Eppig, Jeffrey S. Grethe, Joseph W. Kemnitz, Shawn Iadonato, Stephen D. Larson, Charles Magness, Maryann E. Martone, Mike Tyers, Carlo Torniai, Olga G. Troyanskaya, Judith Turner, Monte Westerfield, Melissa A. Haendel

Proceedings of the 2nd International Conference on Biomedical Ontology, 2011

2010

PhosphoGRID: a database of experimentally verified <i>in vivo</i> protein phosphorylation sites from the budding yeast <i>Saccharomyces cerevisiae</i>.

Chris Stark, Ting-Cheng Su, Ashton Breitkreutz, Pedro Lourenco, Matthew Dahabieh, Bobby-Joe Breitkreutz, Mike Tyers, Ivan Sadowski

Database J. Biol. Databases Curation, 2010

2008

The BioGRID Interaction Database: 2008 update.

Bobby-Joe Breitkreutz, Chris Stark, Teresa Reguly, Lorrie Boucher, Ashton Breitkreutz, Michael S. Livstone, Rose Oughtred, Daniel H. Lackner, Jürg Bähler, Valerie Wood, Kara Dolinski, Mike Tyers

Nucleic Acids Res., 2008

2007

Structure-Templated Predictions of Novel Protein Interactions from Sequence Information.

Doron Betel, Kevin E. Breitkreuz, Ruth Isserlin, Danielle Dewar-Darch, Mike Tyers, Christopher W. V. Hogue

PLoS Comput. Biol., 2007

2006

Evolutionary and Physiological Importance of Hub Proteins.

Nizar N. Batada, Laurence D. Hurst, Mike Tyers

PLoS Comput. Biol., 2006

BioGRID: a general repository for interaction datasets.

Chris Stark, Bobby-Joe Breitkreutz, Teresa Reguly, Lorrie Boucher, Ashton Breitkreutz, Mike Tyers

Nucleic Acids Res., 2006

2004

Biological Data Management: Research, Practice and Opportunities.

Thodoros Topaloglou, Susan B. Davidson, H. V. Jagadish, Victor M. Markowitz, Evan W. Steeg, Mike Tyers

Proceedings of the (e)Proceedings of the Thirtieth International Conference on Very Large Data Bases, VLDB 2004, Toronto, Canada, August 31, 2004