Miguel O. Bernabeu

Orcid: 0000-0002-6456-3756

According to our database1, Miguel O. Bernabeu authored at least 54 papers between 2006 and 2025.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

Legend:

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PhD thesis 
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Links

On csauthors.net:

Bibliography

2025
SpinDoctor-IVIM: A virtual imaging framework for intravoxel incoherent motion MRI.
Medical Image Anal., 2025

2024
Automated neuroradiological support systems for multiple cerebrovascular disease markers - A systematic review and meta-analysis.
CoRR, 2024

Domain-specific augmentations with resolution agnostic self-attention mechanism improves choroid segmentation in optical coherence tomography images.
CoRR, 2024

Training a high-performance retinal foundation model with half-the-data and 400 times less compute.
CoRR, 2024

Applicability of oculomics for individual risk prediction: Repeatability and robustness of retinal Fractal Dimension using DART and AutoMorph.
CoRR, 2024

Stochastic Uncertainty Quantification Techniques Fail to Account for Inter-analyst Variability in White Matter Hyperintensity Segmentation.
Proceedings of the Medical Image Understanding and Analysis - 28th Annual Conference, 2024

2023
Early experiences of integrating an artificial intelligence-based diagnostic decision support system into radiology settings: a qualitative study.
J. Am. Medical Informatics Assoc., December, 2023

Mathematical models of developmental vascular remodelling: A review.
PLoS Comput. Biol., 2023

Choroidalyzer: An open-source, end-to-end pipeline for choroidal analysis in optical coherence tomography.
CoRR, 2023

Efficient and fully-automatic retinal choroid segmentation in OCT through DL-based distillation of a hand-crafted pipeline.
CoRR, 2023

Segmentation of White Matter Hyperintensities and Ischaemic Stroke Lesions in Structural MRI.
Proceedings of the Medical Image Understanding and Analysis - 27th Annual Conference, 2023

Data Efficiency of Segment Anything Model for Optic Disc and Cup Segmentation.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2023 Workshops, 2023

Associations Between Retinal Microvasculature Changes and Gray Matter Volume in a Mid-Life Cohort at Risk of Developing Alzheimer's Disease.
Proceedings of the Ophthalmic Medical Image Analysis - 10th International Workshop, 2023

QuickQual: Lightweight, Convenient Retinal Image Quality Scoring with Off-the-Shelf Pretrained Models.
Proceedings of the Ophthalmic Medical Image Analysis - 10th International Workshop, 2023

2022
Detecting multiple retinal diseases in ultra-widefield fundus imaging and data-driven identification of informative regions with deep learning.
Nat. Mac. Intell., December, 2022

Detection of multiple retinal diseases in ultra-widefield fundus images using deep learning: data-driven identification of relevant regions.
CoRR, 2022

Rethinking Retinal Image Quality: Treating Quality Threshold as a Tunable Hyperparameter.
Proceedings of the Ophthalmic Medical Image Analysis - 9th International Workshop, 2022

Analysing Optical Coherence Tomography Angiography of Mid-Life Persons at Risk of Developing Alzheimer's Disease Later in Life.
Proceedings of the Ophthalmic Medical Image Analysis - 9th International Workshop, 2022

Robust and Efficient Computation of Retinal Fractal Dimension Through Deep Approximation.
Proceedings of the Ophthalmic Medical Image Analysis - 9th International Workshop, 2022

2021
On the preservation of vessel bifurcations during flow-mediated angiogenic remodelling.
PLoS Comput. Biol., 2021

Global explainability in aligned image modalities.
CoRR, 2021

Euler Characteristic Surfaces.
CoRR, 2021

Reproducibility of Retinal Vascular Phenotypes Obtained with Optical Coherence Tomography Angiography: Importance of Vessel Segmentation.
Proceedings of the Medical Image Understanding and Analysis - 25th Annual Conference, 2021

2020
Chaste: Cancer, Heart and Soft Tissue Environment.
J. Open Source Softw., 2020

A Framework for the Discovery of Retinal Biomarkers in Optical Coherence Tomography Angiography (OCTA).
Proceedings of the Ophthalmic Medical Image Analysis - 7th International Workshop, 2020

DR Detection Using Optical Coherence Tomography Angiography (OCTA): A Transfer Learning Approach with Robustness Analysis.
Proceedings of the Ophthalmic Medical Image Analysis - 7th International Workshop, 2020

2019
Automated and Network Structure Preserving Segmentation of Optical Coherence Tomography Angiograms.
CoRR, 2019

2018
A Fully Discrete Open Source Framework for the Simulation of Vascular Remodelling.
Proceedings of the 40th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2018

2015
Ten Simple Rules for a Successful Cross-Disciplinary Collaboration.
PLoS Comput. Biol., 2015

An automated multiscale ensemble simulation approach for vascular blood flow.
J. Comput. Sci., 2015

Characterization of parafoveal hemodynamics associated with diabetic retinopathy with adaptive optics scanning laser ophthalmoscopy and computational fluid dynamics.
Proceedings of the 37th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2015

2014
Ten Simple Rules for Effective Computational Research.
PLoS Comput. Biol., 2014

Chaste: A case study of parallelisation of an open source finite-element solver with applications to computational cardiac electrophysiology simulation.
Int. J. High Perform. Comput. Appl., 2014

Weighted Decomposition in High-Performance Lattice-Boltzmann Simulations: Are Some Lattice Sites More Equal than Others?
Proceedings of the Solving Software Challenges for Exascale, 2014

2013
Chaste: An Open Source C++ Library for Computational Physiology and Biology.
PLoS Comput. Biol., 2013

Analysing and modelling the performance of the HemeLB lattice-Boltzmann simulation environment.
J. Comput. Sci., 2013

Computer simulations reveal complex distribution of haemodynamic forces in a mouse retina model of angiogenesis.
CoRR, 2013

2012
Choice of blood rheology model has minor impact on computational assessment of shear stress mediated vascular risk
CoRR, 2012

Flexible composition and execution of high performance, high fidelity multiscale biomedical simulations
CoRR, 2012

Coalesced communication: a design pattern for complex parallel scientific software
CoRR, 2012

Analyzing and Modeling the Performance of the HemeLB Lattice-Boltzmann Simulation Environment
CoRR, 2012

2011
Scalable parallel preconditioners for an open source cardiac electrophysiology simulation package.
Proceedings of the International Conference on Computational Science, 2011

Implementation and tuning of a parallel symmetric Toeplitz eigensolver.
J. Parallel Distributed Comput., 2011

Simulating Drug-Induced Effects on the Heart: From Ion Channel to Body Surface Electrocardiogram.
Proceedings of the Functional Imaging and Modeling of the Heart, 2011

2010
Stimulus Protocol Determines the Most Computationally Efficient Preconditioner for the Bidomain Equations.
IEEE Trans. Biomed. Eng., 2010

Anisotropic mesh adaptivity for cardiac electrophysiology.
Proceedings of the International Conference on Computational Science, 2010

Simulating cardiac electrophysiology using anisotropic mesh adaptivity.
J. Comput. Sci., 2010

2009
Chaste: A test-driven approach to software development for biological modelling.
Comput. Phys. Commun., 2009

2008
A multilevel parallel algorithm to solve symmetric Toeplitz linear systems.
J. Supercomput., 2008

Parallel computation of the eigenvalues of symmetric Toeplitz matrices through iterative methods.
J. Parallel Distributed Comput., 2008

2007
Robust Parallel Implementation of a Lanczos-based Algorithm for an Structured Electromagnetic Eigenvalue Problem.
Scalable Comput. Pract. Exp., 2007

An Adaptive Interface for the Efficient Computation of the Discrete Sine Transform.
Proceedings of the Parallel Processing and Applied Mathematics, 2007

2006
Parallel Implementation in PC Clusters of a Lanczos-based Algorithm for an Electromagnetic Eigenvalue Problem.
Proceedings of the 5th International Symposium on Parallel and Distributed Computing (ISPDC 2006), 2006

A Parallel Solution of Hermitian Toeplitz Linear Systems, .
Proceedings of the Computational Science, 2006


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