Michael E. Wall

According to our database, Michael E. Wall authored at least 13 papers between 2001 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

Co-design for Particle Applications at Exascale.

Samuel Temple Reeve, Jean-Luc Fattebert, Stephen Dewitt, Pablo Seleson, David Joy, Stuart R. Slattery, Aaron Scheinberg, Rene Halver, Christoph Junghans, Christian F. A. Negre, Michael E. Wall, Yu Zhang, Anders M. N. Niklasson, James F. Belak, Susan M. Mniszewski, Danny Perez

Comput. Sci. Eng., 2024

Accelerating x-ray tracing for exascale systems using Kokkos.

Felix Wittwer, Nicholas K. Sauter, Derek Mendez, Billy K. Poon, Aaron S. Brewster, James M. Holton, Michael E. Wall, William E. Hart, Deborah Bard, Johannes P. Blaschke

Concurr. Comput. Pract. Exp., 2024

2021

Enabling particle applications for exascale computing platforms.

Susan M. Mniszewski, James F. Belak, Jean-Luc Fattebert, Christian F. A. Negre, Stuart R. Slattery, Adetokunbo A. Adedoyin, Robert F. Bird, Choong-Seock Chang, Guangye Chen, Stéphane Ethier, Shane Fogerty, Salman Habib, Christoph Junghans, Damien Lebrun-Grandié, Jamaludin Mohd-Yusof, Stan G. Moore, Daniel Osei-Kuffuor, Steven J. Plimpton, Adrian Pope, Samuel Temple Reeve, Lee F. Ricketson, Aaron Scheinberg, Amil Y. Sharma, Michael E. Wall

Int. J. High Perform. Comput. Appl., 2021

Performance Optimizations of Recursive Electronic Structure Solvers targeting Multi-Core Architectures (LA-UR-20-26665).

Adetokunbo Adedoyin, Christian F. A. Negre, Jamaludin Mohd-Yusof, Nicolas Bock, Daniel Osei-Kuffuor, Jean-Luc Fattebert, Michael E. Wall, Anders M. N. Niklasson, Susan M. Mniszewski

CoRR, 2021

2019

Scaling molecular dynamics beyond 100, 000 processor cores for large-scale biophysical simulations.

Jaewoon Jung, Wataru Nishima, Marcus Daniels, Gavin Bascom, Chigusa Kobayashi, Adetokunbo Adedoyin, Michael E. Wall, Anna Lappala, Dominic Phillips, William Fischer, Chang-Shung Tung, Tamar Schlick, Yuji Sugita, Karissa Y. Sanbonmatsu

J. Comput. Chem., 2019

2013

Detection of Protein Catalytic Sites in the Biomedical Literature.

Karin Verspoor, Andrew MacKinlay, Judith D. Cohn, Michael E. Wall

Proceedings of the Biocomputing 2013: Proceedings of the Pacific Symposium, 2013

2012

Literature mining of protein-residue associations with graph rules learned through distant supervision.

K. E. Ravikumar, Haibin Liu, Judith D. Cohn, Michael E. Wall, Karin Verspoor

J. Biomed. Semant., 2012

2011

Genome Majority Vote Improves Gene Predictions.

Michael E. Wall, Sindhu Raghavan, Judith D. Cohn, John Dunbar

PLoS Comput. Biol., 2011

Pattern Learning through Distant Supervision for Extraction of Protein-Residue Associations in the Biomedical Literature.

K. E. Ravikumar, Haibin Liu, Judith D. Cohn, Michael E. Wall, Karin Verspoor

Proceedings of the 10th International Conference on Machine Learning and Applications and Workshops, 2011

2009

Model of Transcriptional Activation by MarA in <i>Escherichia coli</i>.

Michael E. Wall, David A. Markowitz, Judah L. Rosner, Robert G. Martin

PLoS Comput. Biol., 2009

2007

Domain motions of Argonaute, the catalytic engine of RNA interference.

Dengming Ming, Michael E. Wall, Kevin Y. Sanbonmatsu

BMC Bioinform., 2007

2005

Robustness in gene circuits: clustering of functional responses.

Mary J. Dunlop, Michael E. Wall

Proceedings of the American Control Conference, 2005

2001

SVDMAN-singular value decomposition analysis of microarray data.

Michael E. Wall, Patricia A. Dyck, Thomas S. Brettin

Bioinform., 2001