Michael C. Ryan

According to our database, Michael C. Ryan authored at least 11 papers between 2007 and 2019.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2019

Interactive Clustered Heat Map Builder: An easy web-based tool for creating sophisticated clustered heat maps.

Michael C. Ryan, Mark Stucky, Chris Wakefield, James M. Melott, Rehan Akbani, John N. Weinstein, Bradley M. Broom

F1000Research, 2019

2016

TCGASpliceSeq a compendium of alternative mRNA splicing in cancer.

Michael C. Ryan, Wing Chung Wong, Robert Brown, Rehan Akbani, Xiaoping Su, Bradley M. Broom, James M. Melott, John N. Weinstein

Nucleic Acids Res., 2016

2014

Development and Evaluation of Reference Standards for Image-based Telemedicine Diagnosis and Clinical Research Studies in Ophthalmology.

Michael C. Ryan, Susan Ostmo, Karyn Jonas, Audina Berrocal, Kimberly Drenser, Jason Horowitz, Thomas C. Lee, Charles Simmons, Maria-Ana Martinez-Castellanos, R. V. P. Chan, Michael F. Chiang

Proceedings of the AMIA 2014, 2014

2013

CRAVAT: cancer-related analysis of variants toolkit.

Christopher Douville, Hannah Carter, Rick Kim, Noushin Niknafs, Mark Diekhans, Peter D. Stenson, David N. Cooper, Michael C. Ryan, Rachel Karchin

Bioinform., 2013

2012

SpliceSeq: a resource for analysis and visualization of RNA-Seq data on alternative splicing and its functional impacts.

Michael C. Ryan, James A. Cleland, RyangGuk Kim, Wing Chung Wong, John N. Weinstein

Bioinform., 2012

2011

CHASM and SNVBox: toolkit for detecting biologically important single nucleotide mutations in cancer.

Wing Chung Wong, Dewey Kim, Hannah Carter, Mark Diekhans, Michael C. Ryan, Rachel Karchin

Bioinform., 2011

2010

Ontogenomic study of the relationship between number of gene splice variants and GO categorization.

Ari B. Kahn, Barry Zeeberg, Michael C. Ryan, D. Curtis Jamison, David M. Rockoff, Yves Pommier, John N. Weinstein

Bioinform., 2010

2009

LS-SNP/PDB: annotated non-synonymous SNPs mapped to Protein Data Bank structures.

Michael C. Ryan, Mark Diekhans, Stephanie Lien, Yun Liu, Rachel Karchin

Bioinform., 2009

2008

SpliceCenter: A suite of web-based bioinformatic applications for evaluating the impact of alternative splicing on RT-PCR, RNAi, microarray, and peptide-based studies.

Michael C. Ryan, Barry Zeeberg, Natasha J. Caplen, James A. Cleland, Ari B. Kahn, Hongfang Liu, John N. Weinstein

BMC Bioinform., 2008

2007

SpliceMiner: a high-throughput database implementation of the NCBI Evidence Viewer for microarray splice variant analysis.

Ari B. Kahn, Michael C. Ryan, Hongfang Liu, Barry Zeeberg, D. Curtis Jamison, John N. Weinstein

BMC Bioinform., 2007

AffyProbeMiner: a web resource for computing or retrieving accurately redefined Affymetrix probe sets.

Hongfang Liu, Barry Zeeberg, Gang Qu, Akif Günes Koru, Alessandro Ferrucci, Ari B. Kahn, Michael C. Ryan, Antej Nuhanovic, Peter J. Munson, William C. Reinhold, David W. Kane, John N. Weinstein

Bioinform., 2007