Michael B. Eisen

According to our database, Michael B. Eisen authored at least 21 papers between 2001 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2024

Evolutionary analyses of intrinsically disordered regions reveal widespread signals of conservation.

Marc D. Singleton, Michael B. Eisen

PLoS Comput. Biol., 2024

2015

Ten Years of <i>PLoS^‡ Computational Biology: </i> A Decade of Appreciation and Innovation.

Philip E. Bourne, Steven E. Brenner, Michael B. Eisen

PLoS Comput. Biol., 2015

2010

Integrating Data Clustering and Visualization for the Analysis of 3D Gene Expression Data.

Oliver Rübel, Gunther H. Weber, Min-Yu Huang, E. Wes Bethel, Mark D. Biggin, Charless C. Fowlkes, Cris L. Luengo Hendriks, Soile V. E. Keränen, Michael B. Eisen, David W. Knowles, Jitendra Malik, Hans Hagen, Bernd Hamann

IEEE ACM Trans. Comput. Biol. Bioinform., 2010

Coupling visualization and data analysis for knowledge discovery from multi-dimensional scientific data.

Oliver Rübel, Sean Ahern, E. Wes Bethel, Mark D. Biggin, Hank Childs, Estelle Cormier-Michel, Angela H. DePace, Michael B. Eisen, Charless C. Fowlkes, Cameron G. R. Geddes, Hans Hagen, Bernd Hamann, Min-Yu Huang, Soile V. E. Keränen, David W. Knowles, Cris L. Luengo Hendriks, Jitendra Malik, Jeremy S. Meredith, Peter Messmer, Prabhat

Proceedings of the International Conference on Computational Science, 2010

2008

Use of an Evolutionary Model to Provide Evidence for a Wide Heterogenity of Required Affinities Between Transcription Factors and Their Binding Sites in Yeast.

Richard W. Lusk, Michael B. Eisen

Proceedings of the Biocomputing 2008, 2008

2007

PointCloudXplore 2: Visual Exploration of 3D Gene Expression.

Oliver Rübel, Gunther H. Weber, Min-Yu Huang, E. Wes Bethel, Soile V. E. Keränen, Charless C. Fowlkes, Cris L. Luengo Hendriks, Angela H. DePace, Lisa Simirenko, Michael B. Eisen, Mark D. Biggin, Hans Hagen, Jitendra Malik, David W. Knowles, Bernd Hamann

Proceedings of the Visualization of Large and Unstructured Data Sets: Second workshop of the DFG's International Research Training Group "Visualization of Large and Unstructured Data Sets, 2007

2006

Large-Scale Turnover of Functional Transcription Factor Binding Sites in <i>Drosophila</i>.

Alan M. Moses, Daniel A. Pollard, David A. Nix, Venky N. Iyer, Xiaoyong Li, Mark D. Biggin, Michael B. Eisen

PLoS Comput. Biol., 2006

Detecting the limits of regulatory element conservation and divergence estimation using pairwise and multiple alignments.

Daniel A. Pollard, Alan M. Moses, Venky N. Iyer, Michael B. Eisen

BMC Bioinform., 2006

Design of a combinatorial DNA microarray for protein-DNA interaction studies.

Julian Mintseris, Michael B. Eisen

BMC Bioinform., 2006

PointCloudXplore: A Visualization Tool for 3D Gene Expression Data.

Oliver Rübel, Gunther H. Weber, Soile V. E. Keränen, Charless C. Fowlkes, Cris L. Luengo Hendriks, Lisa Simirenko, Nameeta Y. Shah, Michael B. Eisen, Mark D. Biggin, Hans Hagen, Damir Sudar, Jitendra Malik, David W. Knowles, Bernd Hamann

Proceedings of the Visualization of Large and Unstructured Data Sets: Applications in Geospatial Planning, Modeling and Engineering, 2006

PointCloudXplore: Visual Analysis of 3D Gene Expression Data Using Physical Views and Parallel Coordinates.

Oliver Rübel, Gunther H. Weber, Soile V. E. Keränen, Charless C. Fowlkes, Cris L. Luengo Hendriks, Lisa Simirenko, Nameeta Y. Shah, Michael B. Eisen, Mark D. Biggin, Hans Hagen, Damir Sudar, Jitendra Malik, David W. Knowles, Bernd Hamann

Proceedings of the 8th Joint Eurographics - IEEE VGTC Symposium on Visualization, 2006

Clustering gene expression patterns of fly embryos.

Hanchuan Peng, Fuhui Long, Michael B. Eisen, Eugene W. Myers

Proceedings of the 2006 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2006

2005

<i>PLoS Computational Biology: </i> A New Community Journal.

Philip E. Bourne, Steven E. Brenner, Michael B. Eisen

PLoS Comput. Biol., 2005

GATA: a graphic alignment tool for comparative sequence analysis.

David A. Nix, Michael B. Eisen

BMC Bioinform., 2005

2004

Correction: Benchmarking tools for the alignment of functional noncodingDNA.

Daniel A. Pollard, Casey M. Bergman, Jens Stoye, Susan E. Celniker, Michael B. Eisen

BMC Bioinform., 2004

Benchmarking tools for the alignment of functional noncoding DNA.

Daniel A. Pollard, Casey M. Bergman, Jens Stoye, Susan E. Celniker, Michael B. Eisen

BMC Bioinform., 2004

Phylogenetic Motif Detection by Expectation-Maximization on Evolutionary Mixtures.

Alan M. Moses, Derek Y. Chiang, Michael B. Eisen

Proceedings of the Biocomputing 2004, 2004

2003

Phylogenetically and spatially conserved word pairs associated with gene expression changes in yeasts.

Derek Y. Chiang, Alan M. Moses, Manolis Kamvysselis, Eric S. Lander, Michael B. Eisen

Proceedings of the Sventh Annual International Conference on Computational Biology, 2003

2002

Identification of regulatory elements using a feature selection method.

Sündüz Keles, Mark J. van der Laan, Michael B. Eisen

Bioinform., 2002

2001

The Stanford Microarray Database.

Gavin Sherlock, Tina Hernandez-Boussard, Andrew Kasarskis, Gail Binkley, John C. Matese, Selina S. Dwight, Miroslava Kaloper, Shuai Weng, Heng Jin, Catherine A. Ball, Michael B. Eisen, Paul T. Spellman, Patrick O. Brown, David Botstein, J. Michael Cherry

Nucleic Acids Res., 2001

Visualizing associations between genome sequences and gene expression data using genome-mean expression profiles.

Derek Y. Chiang, Patrick O. Brown, Michael B. Eisen

Proceedings of the Ninth International Conference on Intelligent Systems for Molecular Biology, 2001