Menachem Fromer

According to our database, Menachem Fromer authored at least 16 papers between 2004 and 2018.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of two.

2018

Transforming Psychiatry into Data-Driven Medicine with Digital Measurement Tools.

Honor Hsin, Menachem Fromer, Bret Peterson, Collin Walter, Mathias S. Fleck, Andrew Campbell, Paul Varghese, Robert M. Califf

npj Digit. Medicine, 2018

2012

zCall: a rare variant caller for array-based genotyping: Genetics and population analysis.

Jacqueline I. Goldstein, Andrew Crenshaw, Jason P. Carey, George B. Grant, Jared Maguire, Menachem Fromer, Colm O'Dushlaine, Jennifer L. Moran, Kimberly Chambert, Christine Stevens, Pamela Sklar, Christina M. Hultman, Shaun Purcell, Steven A. McCarroll, Patrick F. Sullivan, Mark J. Daly, Benjamin M. Neale

Bioinform., 2012

2011

Recovering key biological constituents through sparse representation of gene expression.

Yosef Prat, Menachem Fromer, Nathan Linial, Michal Linial

Bioinform., 2011

Geometric Interpretation of Gene Expression by Sparse Reconstruction of Transcript Profiles.

Yosef Prat, Menachem Fromer, Michal Linial, Nathan Linial

Proceedings of the Research in Computational Molecular Biology, 2011

2010

A probabilistic approach to the design of structural selectivity of proteins (נוספו שער, תקציר ותכן בעברית: גישה הסתברותית לתכנון של סלקטיביות מבנית של חלבונים.).

Menachem Fromer

PhD thesis, 2010

PANDORA: analysis of protein and peptide sets through the hierarchical integration of annotations.

Nadav Rappoport, Menachem Fromer, Regev Schweiger, Michal Linial

Nucleic Acids Res., 2010

SPRINT: side-chain prediction inference toolbox for multistate protein design.

Menachem Fromer, Chen Yanover, Amir Harel, Ori Shachar, Yair Weiss, Michal Linial

Bioinform., 2010

Exposing the co-adaptive potential of protein-protein interfaces through computational sequence design.

Menachem Fromer, Michal Linial

Bioinform., 2010

2009

Tradeoff Between Stability and Multispecificity in the Design of Promiscuous Proteins.

Menachem Fromer, Julia M. Shifman

PLoS Comput. Biol., 2009

An LP View of the M-best MAP problem.

Menachem Fromer, Amir Globerson

Proceedings of the Advances in Neural Information Processing Systems 22: 23rd Annual Conference on Neural Information Processing Systems 2009. Proceedings of a meeting held 7-10 December 2009, 2009

2008

Efficient algorithms for accurate hierarchical clustering of huge datasets: tackling the entire protein space.

Yaniv Loewenstein, Elon Portugaly, Menachem Fromer, Michal Linial

Proceedings of the Proceedings 16th International Conference on Intelligent Systems for Molecular Biology (ISMB), 2008

A computational framework to empower probabilistic protein design.

Menachem Fromer, Chen Yanover

Proceedings of the Proceedings 16th International Conference on Intelligent Systems for Molecular Biology (ISMB), 2008

2007

Dead-end elimination for multistate protein design.

Chen Yanover, Menachem Fromer, Julia M. Shifman

J. Comput. Chem., 2007

When Less Is More: Improving Classification of Protein Families with a Minimal Set of Global Features.

Roy Varshavsky, Menachem Fromer, Amit Man, Michal Linial

Proceedings of the Algorithms in Bioinformatics, 7th International Workshop, 2007

2005

ProtoNet 4.0: A hierarchical classification of one million protein sequences.

Noam Kaplan, Ori Sasson, Uri Inbar, Moriah Friedlich, Menachem Fromer, Hillel Fleischer, Elon Portugaly, Nathan Linial, Michal Linial

Nucleic Acids Res., 2005

2004

A functional hierarchical organization of the protein sequence space.

Noam Kaplan, Moriah Friedlich, Menachem Fromer, Michal Linial

BMC Bioinform., 2004