Matti Pirinen

According to our database, Matti Pirinen authored at least 17 papers between 2006 and 2024.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of three.

2024

Exploring machine learning strategies for predicting cardiovascular disease risk factors from multi-omic data.

Gabin Drouard, Juha Mykkänen, Jarkko Heiskanen, Joona Pohjonen, Saku Ruohonen, Katja Pahkala, Terho Lehtimäki, Xiaoling Wang, Miina Ollikainen, Samuli Ripatti, Matti Pirinen, Olli T. Raitakari, Jaakko Kaprio

BMC Medical Informatics Decis. Mak., December, 2024

2023

linemodels: clustering effects based on linear relationships.

Matti Pirinen

Bioinform., March, 2023

2021

Comparison of nomogram with machine learning techniques for prediction of overall survival in patients with tongue cancer.

Rasheed Omobolaji Alabi, Antti A. Mäkitie, Matti Pirinen, Mohammed Elmusrati, Ilmo Leivo, Alhadi Almangush

Int. J. Medical Informatics, 2021

Machine learning in oral squamous cell carcinoma: Current status, clinical concerns and prospects for future - A systematic review.

Rasheed Omobolaji Alabi, Omar Youssef, Matti Pirinen, Mohammed Elmusrati, Antti A. Mäkitie, Ilmo Leivo, Alhadi Almangush

Artif. Intell. Medicine, 2021

2018

Differences in the Commonly used Genotype Imputation Algorithms and Their Imputation Accuracy Estimates.

Kalle Parn, Matti Pirinen, Mart Kals, Reedik Mägi, Veikko Salomaa, Michael Boehnke, Ira Hall, Nathan Stitziel, Nelson Freimer, Mark J. Daly, Aarno Palotie, Samuli Ripatti, Priit Palta

Proceedings of the 14th IEEE International Conference on e-Science, 2018

2017

biMM: efficient estimation of genetic variances and covariances for cohorts with high-dimensional phenotype measurements.

Matti Pirinen, Christian Benner, Pekka Marttinen, Marjo-Riitta Järvelin, Manuel A. Rivas, Samuli Ripatti

Bioinform., 2017

2016

Multiple Output Regression with Latent Noise.

Jussi Gillberg, Pekka Marttinen, Matti Pirinen, Antti J. Kangas, Pasi Soininen, Mehreen Ali, Aki S. Havulinna, Marjo-Riitta Järvelin, Mika Ala-Korpela, Samuel Kaski

J. Mach. Learn. Res., 2016

metaCCA: summary statistics-based multivariate meta-analysis of genome-wide association studies using canonical correlation analysis.

Anna Cichonska, Juho Rousu, Pekka Marttinen, Antti J. Kangas, Pasi Soininen, Terho Lehtimäki, Olli T. Raitakari, Marjo-Riitta Järvelin, Veikko Salomaa, Mika Ala-Korpela, Samuli Ripatti, Matti Pirinen

Bioinform., 2016

FINEMAP: efficient variable selection using summary data from genome-wide association studies.

Christian Benner, Chris C. A. Spencer, Aki S. Havulinna, Veikko Salomaa, Samuli Ripatti, Matti Pirinen

Bioinform., 2016

2015

Assessing allele-specific expression across multiple tissues from RNA-seq read data.

Matti Pirinen, Tuuli Lappalainen, Noah A. Zaitlen, Emmanouil T. Dermitzakis, Peter Donnelly, Mark I. McCarthy, Manuel A. Rivas

Bioinform., 2015

2014

Assessing multivariate gene-metabolome associations with rare variants using Bayesian reduced rank regression.

Pekka Marttinen, Matti Pirinen, Antti-Pekka Sarin, Jussi Gillberg, Johannes Kettunen, Ida Surakka, Antti J. Kangas, Pasi Soininen, Paul F. O'Reilly, Marika Kaakinen, Mika Kähönen, Terho Lehtimäki, Mika Ala-Korpela, Olli T. Raitakari, Veikko Salomaa, Marjo-Riitta Järvelin, Samuli Ripatti, Samuel Kaski

Bioinform., 2014

2013

Bayesian Information Sharing Between Noise And Regression Models Improves Prediction of Weak Effects.

Jussi Gillberg, Pekka Marttinen, Matti Pirinen, Antti J. Kangas, Pasi Soininen, Marjo-Riitta Järvelin, Mika Ala-Korpela, Samuel Kaski

CoRR, 2013

Assessing association between protein truncating variants and quantitative traits.

Manuel A. Rivas, Matti Pirinen, Matthew J. Neville, Kyle J. Gaulton, Loukas Moutsianas, Cecilia M. Lindgren, Fredrik Karpe, Mark I. McCarthy, Peter Donnelly

Bioinform., 2013

2011

Estimating Haplotype Frequencies by Combining Data from Large DNA Pools with Database Information.

Dario Gasbarra, Sangita Kulathinal, Matti Pirinen, Mikko J. Sillanpää

IEEE ACM Trans. Comput. Biol. Bioinform., 2011

2009

Estimating population haplotype frequencies from pooled SNP data using incomplete database information.

Matti Pirinen

Bioinform., 2009

2007

Estimating genealogies from linked marker data: a Bayesian approach.

Dario Gasbarra, Matti Pirinen, Mikko J. Sillanpää, Elja Arjas

BMC Bioinform., 2007

2006

Finding Consistent Gene Transmission Patterns on Large and Complex Pedigrees.

Matti Pirinen, Dario Gasbarra

IEEE ACM Trans. Comput. Biol. Bioinform., 2006