Matthias Samwald
Orcid: 0000-0002-4855-2571
According to our database1,
Matthias Samwald
authored at least 84 papers
between 2005 and 2024.
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Bibliography
2024
PeerJ Comput. Sci., 2024
Exploring the landscape of large language models: Foundations, techniques, and challenges.
CoRR, 2024
2023
Pattern Anal. Appl., November, 2023
Benchmark datasets driving artificial intelligence development fail to capture the needs of medical professionals.
J. Biomed. Informatics, January, 2023
CoRR, 2023
An automatically discovered chain-of-thought prompt generalizes to novel models and datasets.
CoRR, 2023
Model-agnostic explainable artificial intelligence for object detection in image data.
CoRR, 2023
CSMeD: Bridging the Dataset Gap in Automated Citation Screening for Systematic Literature Reviews.
Proceedings of the Advances in Neural Information Processing Systems 36: Annual Conference on Neural Information Processing Systems 2023, 2023
2022
Neural Networks, 2022
A study into patient similarity through representation learning from medical records.
Knowl. Inf. Syst., 2022
Improving the robustness and accuracy of biomedical language models through adversarial training.
J. Biomed. Informatics, 2022
CoRR, 2022
A global analysis of metrics used for measuring performance in natural language processing.
CoRR, 2022
Mapping global dynamics of benchmark creation and saturation in artificial intelligence.
CoRR, 2022
Deep Learning, Natural Language Processing, and Explainable Artificial Intelligence in the Biomedical Domain.
CoRR, 2022
LinkExplorer: predicting, explaining and exploring links in large biomedical knowledge graphs.
Bioinform., 2022
Proceedings of the Advances in Neural Information Processing Systems 35: Annual Conference on Neural Information Processing Systems 2022, 2022
2021
IEEE J. Biomed. Health Informatics, 2021
Expert Syst. Appl., 2021
A curated, ontology-based, large-scale knowledge graph of artificial intelligence tasks and benchmarks.
CoRR, 2021
Proceedings of the 2021 Conference on Empirical Methods in Natural Language Processing, 2021
SAFRAN: An interpretable, rule-based link prediction method outperforming embedding models.
Proceedings of the 3rd Conference on Automated Knowledge Base Construction, 2021
2020
Benchmarking neural embeddings for link prediction in knowledge graphs under semantic and structural changes.
J. Web Semant., 2020
Summarization of biomedical articles using domain-specific word embeddings and graph ranking.
J. Biomed. Informatics, 2020
Scalable and interpretable rule-based link prediction for large heterogeneous knowledge graphs.
CoRR, 2020
CoRR, 2020
A critical analysis of metrics used for measuring progress in artificial intelligence.
CoRR, 2020
Deep contextualized embeddings for quantifying the informative content in biomedical text summarization.
Comput. Methods Programs Biomed., 2020
Bioinform., 2020
Dividing the Ontology Alignment Task with Semantic Embeddings and Logic-Based Modules.
Proceedings of the ECAI 2020 - 24th European Conference on Artificial Intelligence, 29 August-8 September 2020, Santiago de Compostela, Spain, August 29 - September 8, 2020, 2020
2019
OpenBioLink: A resource and benchmarking framework for large-scale biomedical link prediction.
CoRR, 2019
Clustering of Deep Contextualized Representations for Summarization of Biomedical Texts.
CoRR, 2019
Neural sentence embedding models for semantic similarity estimation in the biomedical domain.
BMC Bioinform., 2019
Proceedings of the 5th Workshop on Semantic Deep Learning, 2019
2018
Implementing pharmacogenomics decision support across seven European countries: The Ubiquitous Pharmacogenomics (U-PGx) project.
J. Am. Medical Informatics Assoc., 2018
Breaking-down the Ontology Alignment Task with a Lexical Index and Neural Embeddings.
CoRR, 2018
BMC Bioinform., 2018
We divide, you conquer: from large-scale ontology alignment to manageable subtasks with a lexical index and neural embeddings.
Proceedings of the 13th International Workshop on Ontology Matching co-located with the 17th International Semantic Web Conference, 2018
Proceedings of the Joint proceedings of the 4th Workshop on Semantic Deep Learning (SemDeep-4) and NLIWoD4: Natural Language Interfaces for the Web of Data (NLIWOD-4) and 9th Question Answering over Linked Data challenge (QALD-9) co-located with 17th International Semantic Web Conference (ISWC 2018), Monterey, California, United States of America, October 8th, 2018
Fast and Scalable Learning of Neuro-Symbolic Representations of Biomedical Knowledge.
Proceedings of the First Workshop on Deep Learning for Knowledge Graphs and Semantic Technologies (DL4KGS) co-located with the 15th Extended Semantic Web Conerence (ESWC 2018), 2018
Effects of Medical Device Regulations on the Development of Stand-Alone Medical Software: A Pilot Study.
Proceedings of the Health Informatics Meets eHealth - Biomedical Meets eHealth - From Sensors to Decisions, 2018
2017
The Importance of Gene-Drug-Drug-Interactions in Pharmacogenomics Decision Support: An Analysis Based on Austrian Claims Data.
Proceedings of the Health Informatics Meets eHealth - Digital Insight - Information-Driven Health & Care, 2017
2016
How Many Patients Could Benefit From Pre-emptive Pharmacogenomic Testing and Decision Support? A Retrospective Study Based on Nationwide Austrian Claims Data.
Proceedings of the Health Informatics Meets eHealth - Predictive Modeling in Healthcare - From Prediction to Prevention, 2016
2015
Pharmacogenomic knowledge representation, reasoning and genome-based clinical decision support based on OWL 2 DL ontologies.
BMC Medical Informatics Decis. Mak., 2015
Toward a complete dataset of drug-drug interaction information from publicly available sources.
J. Biomed. Informatics, 2015
Applying deep learning techniques on medical corpora from the World Wide Web: a prototypical system and evaluation.
CoRR, 2015
2014
The Semanticscience Integrated Ontology (SIO) for biomedical research and knowledge discovery.
J. Biomed. Semant., 2014
An Update on Genomic CDS, a Complex Ontology for Pharmacogenomics and Clinical Decision Support.
Proceedings of the Informal Proceedings of the 3rd International Workshop on OWL Reasoner Evaluation (ORE 2014) co-located with the Vienna Summer of Logic (VSL 2014), 2014
Proceedings of the e-Health - For Continuity of Care - Proceedings of MIE2014, the 25th European Medical Informatics Conference, Istanbul, Turkey, August 31, 2014
Proceedings of the e-Health - For Continuity of Care - Proceedings of MIE2014, the 25th European Medical Informatics Conference, Istanbul, Turkey, August 31, 2014
Visualising topic networks in infection control using word vector analysis.
Proceedings of the e-Health - For Continuity of Care - Proceedings of MIE2014, the 25th European Medical Informatics Conference, Istanbul, Turkey, August 31, 2014
Towards a Global IT System for Personalized Medicine: the Medicine Safety Code Initiative.
Proceedings of the Health Informatics Meets eHealth, 2014
2013
Pharmacogenomics in the pocket of every patient? A prototype based on quick response codes.
J. Am. Medical Informatics Assoc., 2013
Genomic CDS: an Example of a Complex Ontology for Pharmacogenetics and Clinical Decision Support.
Proceedings of the Informal Proceedings of the 2nd International Workshop on OWL Reasoner Evaluation (ORE-2013), 2013
Physicians searching the web for medical question answering: A European survey and local user studies.
Proceedings of the MEDINFO 2013, 2013
An RDF/OWL Knowledge Base for Query Answering and Decision Support in Clinical Pharmacogenetics.
Proceedings of the MEDINFO 2013, 2013
Khresmoi - Multilingual Semantic Search of Medical Text and Images.
Proceedings of the MEDINFO 2013, 2013
Proceedings of the Information Access Evaluation. Multilinguality, Multimodality, and Visualization, 2013
2012
Emerging practices for mapping and linking life sciences data using RDF - A case series.
J. Web Semant., 2012
J. Biomed. Informatics, 2012
2011
J. Cheminformatics, 2011
The Translational Medicine Ontology and Knowledge Base: driving personalized medicine by bridging the gap between bench and bedside.
J. Biomed. Semant., 2011
Towards an Interoperable Information Infrastructure Providing Decision Support for Genomic Medicine.
Proceedings of the User Centered Networked Health Care - Proceedings of MIE 2011, 2011
2010
Establishing a distributed system for the simple representation and integration of diverse scientific assertions.
J. Biomed. Semant., 2010
Artif. Intell. Medicine, 2010
Provenance of Microarray Experiments for a Better Understanding of Experiment Results.
Proceedings of the Second International Workshop on the role of Semantic Web in Provenance Management, 2010
2009
Proceedings of the Social Semantic Web: Web 2.0 - Was nun?, 2009
Federating Distributed Social Data to Build an Interlinked Online Information Society.
IEEE Intell. Syst., 2009
BMC Bioinform., 2009
Briefings Bioinform., 2009
Entrez Neuron RDFa: A Pragmatic Semantic Web Application for Data Integration in Neuroscience Research.
Proceedings of the Medical Informatics in a United and Healthy Europe - Proceedings of MIE 2009, The XXIInd International Congress of the European Federation for Medical Informatics, Sarajevo, Bosnia and Herzegovina, August 30, 2009
Proceedings of the 5th International Conference on Semantic Systems, 2009
2008
Proceedings of the Semantic Web: Research and Applications, 2008
Proceedings of the Poster Track of the 5th European Semantic Web Conference (ESWC2008) Tenerife (Spain), 01, 2008
Proceedings of the Semantic Web: Research and Applications, 2008
2007
Proceedings of the Semantic Web: Real-World Applications from Industry, 2007
2005
Proceedings of the 2005 International Conference on Computational Intelligence for Modelling Control and Automation (CIMCA 2005), 2005