Matthew N. McCall

According to our database, Matthew N. McCall authored at least 16 papers between 2011 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

Correction: Multiple imputation and direct estimation for qPCR data with non-detects.

Valeriia Sherina, Helene R. McMurray, Winslow Powers, Hartmut Land, Tanzy M. T. Love, Matthew N. McCall

BMC Bioinform., December, 2024

2021

A systems genomics approach uncovers molecular associates of RSV severity.

Matthew N. McCall, Chin-Yi Chu, Lu Wang, Lauren Benoodt, Juilee Thakar, Anthony Corbett, Jeanne Holden-Wiltse, Christopher Slaunwhite, Alex Grier, Steven R. Gill, Ann R. Falsey, David J. Topham, Mary T. Caserta, Edward E. Walsh, Xing Qiu, Thomas J. Mariani

PLoS Comput. Biol., 2021

Autoregressive modeling and diagnostics for qPCR amplification.

Benjamin Hsu, Valeriia Sherina, Matthew N. McCall

Bioinform., 2021

The effect of tissue composition on gene co-expression.

Yun Zhang, Jonavelle Cuerdo, Marc K. Halushka, Matthew N. McCall

Briefings Bioinform., 2021

2020

Multiple imputation and direct estimation for qPCR data with non-detects.

Valeriia Sherina, Helene R. McMurray, Winslow Powers, Hartmut Land, Tanzy M. T. Love, Matthew N. McCall

BMC Bioinform., 2020

2017

<i>miRcomp-Shiny</i>: Interactive assessment of qPCR-based microRNA quantification and quality control algorithms.

Lauren Kemperman, Matthew N. McCall

F1000Research, 2017

2016

A benchmark for microRNA quantification algorithms using the OpenArray platform.

Matthew N. McCall, Alexander S. Baras, Alexander Crits-Christoph, Roxann Ingersoll, Melissa A. McAlexander, Kenneth W. Witwer, Marc K. Halushka

BMC Bioinform., 2016

2014

The Gene Expression Barcode 3.0: improved data processing and mining tools.

Matthew N. McCall, Harris A. Jaffee, Susan J. Zelisko, Neeraj Sinha, Guido J. E. K. Hooiveld, Rafael A. Irizarry, Michael J. Zilliox

Nucleic Acids Res., 2014

On non-detects in qPCR data.

Matthew N. McCall, Helene R. McMurray, Hartmut Land, Anthony Almudevar

Bioinform., 2014

2013

ChIP-PED enhances the analysis of ChIP-seq and ChIP-chip data.

George Wu, Jason T. Yustein, Matthew N. McCall, Michael J. Zilliox, Rafael A. Irizarry, Karen Zeller, Chi V. Dang, Hongkai Ji

Bioinform., 2013

2012

Gene expression anti-profiles as a basis for accurate universal cancer signatures.

Héctor Corrada Bravo, Vasyl Pihur, Matthew N. McCall, Rafael A. Irizarry, Jeffrey T. Leek

BMC Bioinform., 2012

fRMA ST: frozen robust multiarray analysis for Affymetrix Exon and Gene ST arrays.

Matthew N. McCall, Harris A. Jaffee, Rafael A. Irizarry

Bioinform., 2012

Affymetrix GeneChip microarray preprocessing for multivariate analyses.

Matthew N. McCall, Anthony Almudevar

Briefings Bioinform., 2012

2011

The Gene Expression Barcode: leveraging public data repositories to begin cataloging the human and murine transcriptomes.

Matthew N. McCall, Karan Uppal, Harris A. Jaffee, Michael J. Zilliox, Rafael A. Irizarry

Nucleic Acids Res., 2011

Assessments of Affymetrix GeneChip Microarray Quality for Laboratories and Single Samples.

Matthew N. McCall, Peter N. Murakami, Margus Lukk, Wolfgang Huber, Rafael A. Irizarry

BMC Bioinform., 2011

Thawing Frozen Robust Multi-array Analysis (fRMA).

Matthew N. McCall, Rafael A. Irizarry

BMC Bioinform., 2011