Matteo Brilli

According to our database, Matteo Brilli authored at least 10 papers between 2007 and 2016.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2016

COLOMBOS v3.0: leveraging gene expression compendia for cross-species analyses.

Marco Moretto, Paolo Sonego, Nicolas Dierckxsens, Matteo Brilli, Luca Bianco, Daniela Ledezma-Tejeida, Socorro Gama-Castro, Marco Galardini, Chiara Romualdi, Kris Laukens, Julio Collado-Vides, Pieter Meysman, Kristof Engelen

Nucleic Acids Res., 2016

2015

Evolution of Intra-specific Regulatory Networks in a Multipartite Bacterial Genome.

Marco Galardini, Matteo Brilli, Giulia Spini, Matteo Rossi, Bianca Roncaglia, Alessia Bani, Manuela Chiancianesi, Marco Moretto, Kristof Engelen, Giovanni Bacci, Francesco Pini, Emanuele G. Biondi, Marco Bazzicalupo, Alessio Mengoni

PLoS Comput. Biol., 2015

2011

Identification of metabolic network models from incomplete high-throughput datasets.

Sara Berthoumieux, Matteo Brilli, Hidde de Jong, Daniel Kahn, Eugenio Cinquemani

Bioinform., 2011

2010

The diversity and evolution of cell cycle regulation in alpha-proteobacteria: a comparative genomic analysis.

Matteo Brilli, Marco Fondi, Renato Fani, Alessio Mengoni, Lorenzo Ferri, Marco Bazzicalupo, Emanuele G. Biondi

BMC Syst. Biol., 2010

2008

Analysis of plasmid genes by phylogenetic profiling and visualization of homology relationships using Blast2Network.

Matteo Brilli, Alessio Mengoni, Marco Fondi, Marco Bazzicalupo, Pietro Liò, Renato Fani

BMC Bioinform., 2008

Current trends in the bioinformatic sequence analysis of metabolic pathways in prokaryotes.

Matteo Brilli, Renato Fani, Pietro Liò

Briefings Bioinform., 2008

Topological Metrics in Blast Data Mining: Plasmid and Nitrogen-Fixing Proteins Case Studies.

Pietro Liò, Matteo Brilli, Renato Fani

Proceedings of the Bioinformatics Research and Development, 2008

2007

The CAI Analyser Package: Inferring Gene Expressivity from Raw Genomic Data.

Matteo Ramazzotti, Matteo Brilli, Renato Fani, Giampaolo Manao, Donatella Degl'Innocenti

Silico Biol., 2007

On the origin and evolution of biosynthetic pathways: integrating microarray data with structure and organization of the Common Pathway genes.

Marco Fondi, Matteo Brilli, Renato Fani

BMC Bioinform., 2007

MotifScorer: using a compendium of microarrays to identify regulatory motifs.

Matteo Brilli, Renato Fani, Pietro Liò

Bioinform., 2007